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LOC103821875 ceramide synthase 4-like [ Serinus canaria (Common canary) ]

Gene ID: 103821875, updated on 12-Aug-2024

Summary

Gene symbol
LOC103821875
Gene description
ceramide synthase 4-like
See related
EnsemblRapid:ENSSCAG00000000761
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
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Genomic context

See LOC103821875 in Genome Data Viewer
Location:
chromosome: 28
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current serCan2020 (GCF_022539315.1) 28 NC_066341.1 (4986211..5026582)

Chromosome 28 - NC_066341.1Genomic Context describing neighboring genes Neighboring gene thaicobrin-like Neighboring gene butyrophilin subfamily 1 member A1-like Neighboring gene uncharacterized LOC127060946 Neighboring gene ceramide synthase 4-like Neighboring gene ectoderm-neural cortex protein 1-like Neighboring gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated

Genomic regions, transcripts, and products

Genomic Sequence:
NC_066341.1 Chromosome 28 Reference serCan2020 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539315.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference serCan2020 Primary Assembly

Genomic

  1. NC_066341.1 Reference serCan2020 Primary Assembly

    Range
    4986211..5026582
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_050985972.1XP_050841929.1  ceramide synthase 4-like isoform X4

  2. XM_050985973.1XP_050841930.1  ceramide synthase 4-like isoform X4

  3. XM_018921720.2XP_018777265.1  ceramide synthase 4-like isoform X4

    Conserved Domains (2) summary
    smart00724
    Location:131331
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  4. XM_018921718.3XP_018777263.1  ceramide synthase 4-like isoform X4

    Conserved Domains (2) summary
    smart00724
    Location:131331
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  5. XM_018921719.3XP_018777264.1  ceramide synthase 4-like isoform X4

    Conserved Domains (2) summary
    smart00724
    Location:131331
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:71128
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  6. XM_018921715.3XP_018777260.1  ceramide synthase 4-like isoform X2

    UniProtKB/TrEMBL
    A0A8C9KWV6
    Related
    ENSSCAP00000000909.1, ENSSCAT00000001031.2
    Conserved Domains (2) summary
    smart00724
    Location:143343
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:83140
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  7. XM_018921716.3XP_018777261.1  ceramide synthase 4-like isoform X2

    UniProtKB/TrEMBL
    A0A8C9KWV6
    Conserved Domains (2) summary
    smart00724
    Location:143343
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:83140
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  8. XM_018921722.2XP_018777267.2  ceramide synthase 4-like isoform X3

  9. XM_030231831.1XP_030087691.1  ceramide synthase 4-like isoform X1

    Conserved Domains (2) summary
    smart00724
    Location:163363
    TLC; TRAM, LAG1 and CLN8 homology domains
    cd00086
    Location:103160
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  10. XM_050985974.1XP_050841931.1  ceramide synthase 4-like isoform X5

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