GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
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GlycoNAVI Proteins | November 28, 2024 |
PDB ID | UniProt ID | Title | Descriptor ▼ |
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1LLR | 48890 | CHOLERA TOXIN B-PENTAMER WITH LIGAND BMSC-0012 | CHOLERA TOXIN B SUBUNIT |
1CPO | P04963 | CHLOROPEROXIDASE | CHLOROPEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE |
2CPO | P04963 | CHLOROPEROXIDASE | CHLOROPEROXIDASE, PROTOPORPHYRIN IX CONTAINING FE |
4AY1 | Q15782 | Human YKL-39 is a pseudo-chitinase with retained chitooligosaccharide binding properties | CHITINASE-3-LIKE PROTEIN 2 |
7L6O | A0A1W6IPB2 | Cryo-EM structure of HIV-1 Env CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 | CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp120, CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp41 |
7L6O | 7L6O | Cryo-EM structure of HIV-1 Env CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 | CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp120, CH848.3.D0949.10.17chim.6R.DS.SOSIP.664 - gp41 |
7LUA | A0A1W6IPB2 | Cryo-EM structure of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer | CH848 SOSIP gp120, CH848 SOSIP gp41, DH898.1 light chain, DH898.1 heavy chain |
7LUA | A0A6H1VEB8 | Cryo-EM structure of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer | CH848 SOSIP gp120, CH848 SOSIP gp41, DH898.1 light chain, DH898.1 heavy chain |
7LUA | 7LUA | Cryo-EM structure of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer | CH848 SOSIP gp120, CH848 SOSIP gp41, DH898.1 light chain, DH898.1 heavy chain |
6UDA | M4M0W3 | Cryo-EM structure of CH235UCA bound to Man5-enriched CH505.N279K.G458Y.SOSIP.664 | CH505.N279K.G458Y.SOSIP.664 gp120, CH235 UCA heavy chain Fab, CH505.N279K.G458Y.SOSIP.664 gp41, CH235 UCA light chain Fab |
6UDA | 6UDA | Cryo-EM structure of CH235UCA bound to Man5-enriched CH505.N279K.G458Y.SOSIP.664 | CH505.N279K.G458Y.SOSIP.664 gp120, CH235 UCA heavy chain Fab, CH505.N279K.G458Y.SOSIP.664 gp41, CH235 UCA light chain Fab |
6UDA | Q2N0S5 | Cryo-EM structure of CH235UCA bound to Man5-enriched CH505.N279K.G458Y.SOSIP.664 | CH505.N279K.G458Y.SOSIP.664 gp120, CH235 UCA heavy chain Fab, CH505.N279K.G458Y.SOSIP.664 gp41, CH235 UCA light chain Fab |
1KCW | P00450 | X-RAY CRYSTAL STRUCTURE OF HUMAN CERULOPLASMIN AT 3.0 ANGSTROMS | CERULOPLASMIN, OXYGEN ATOM |
2XQO | A3DCJ4 | CtCel124: a cellulase from Clostridium thermocellum | CELLULOSOME ENZYME, DOCKERIN TYPE I |
1D7B | 1314367 | CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 7.5 | CELLOBIOSE DEHYDROGENASE (E.C.1.1.3.25) |
1D7C | 1314367 | CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 4.6 | CELLOBIOSE DEHYDROGENASE (E.C.1.1.3.25) |
1D7D | 1314367 | CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, HP3 FRAGMENT, PH 7.5 | CELLOBIOSE DEHYDROGENASE (E.C.1.1.3.25) |
1GZ1 | 1GZ1 | Mutant D416A of the CELLOBIOHYDROLASE CEL6A FROM HUMICOLA INSOLENS in complex with methyl-cellobiosyl-4-deoxy-4-thio-beta-D-cellobioside | CELLOBIOHYDROLASE II (E.C.3.2.1.91) |
1QJW | P07987 | CEL6A (Y169F) WITH A NON-HYDROLYSABLE CELLOTETRAOSE | CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) (E.C.3.2.1.91) |
1QK0 | P07987 | CEL6A WITH A NON-HYDROLYSABLE CELLOTETRAOSE | CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) (E.C.3.2.1.91) |
1QK2 | P07987 | WILD TYPE CEL6A WITH A NON-HYDROLYSABLE CELLOTETRAOSE | CELLOBIOHYDROLASE CEL6A (FORMERLY CALLED CBH II) (E.C.3.2.1.91) |
4BFE | Q6XJV4 | Structure of the extracellular portion of mouse CD200RLa | CELL SURFACE GLYCOPROTEIN CD200 RECEPTOR 4 |
2VTC | Q7Z9M7 | The structure of a glycoside hydrolase family 61 member, Cel61B from the Hypocrea jecorina. | CEL61B |
3R4D | Q3LFS8 | Crystal structure of mouse coronavirus receptor-binding domain complexed with its murine receptor | CEA-related cell adhesion molecule 1, isoform 1/2S, Spike glycoprotein |
3R4D | S5ZBM1 | Crystal structure of mouse coronavirus receptor-binding domain complexed with its murine receptor | CEA-related cell adhesion molecule 1, isoform 1/2S, Spike glycoprotein |
1CDR | P13987 | STRUCTURE OF A SOLUBLE, GLYCOSYLATED FORM OF THE HUMAN COMPLEMENT REGULATORY PROTEIN CD59 | CD59 COMPLEXED WITH GLCNAC-BETA-1,4-GLCNAC-BETA-1 (NMR, 10 STRUCTURES) |
1CDS | P13987 | STRUCTURE OF A SOLUBLE, GLYCOSYLATED FORM OF THE HUMAN COMPLEMENT REGULATORY PROTEIN CD59 | CD59 COMPLEXED WITH GLCNAC-BETA-1,4-(FUC-ALPHA-1,6)-GLCNAC-BETA-1 (NMR, 10 STRUCTURES) |
4MRD | P15379 | Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule | CD44 antigen |
1HNF | P06729 | CRYSTAL STRUCTURE OF THE EXTRACELLULAR REGION OF THE HUMAN CELL ADHESION MOLECULE CD2 AT 2.5 ANGSTROMS RESOLUTION | CD2 (HUMAN) |
3RG1 | A6QNK7 | Crystal structure of the RP105/MD-1 complex | CD180 molecule, LY86 protein |
3RG1 | A4IFT3 | Crystal structure of the RP105/MD-1 complex | CD180 molecule, LY86 protein |
3B2D | Q99467 | Crystal structure of human RP105/MD-1 complex | CD180 antigen, Lymphocyte antigen 86 |
3B2D | O95711 | Crystal structure of human RP105/MD-1 complex | CD180 antigen, Lymphocyte antigen 86 |
3T6Q | Q62192 | Crystal structure of mouse RP105/MD-1 complex | CD180 antigen, Lymphocyte antigen 86 |
3T6Q | O88188 | Crystal structure of mouse RP105/MD-1 complex | CD180 antigen, Lymphocyte antigen 86 |
2V5N | 2V5N | STRUCTURE OF HUMAN IGF2R DOMAINS 11-12 | CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR |
2V5N | P11717 | STRUCTURE OF HUMAN IGF2R DOMAINS 11-12 | CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR |
2V5N | 2V5N | STRUCTURE OF HUMAN IGF2R DOMAINS 11-12 | CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR |
2V5N | P11717 | STRUCTURE OF HUMAN IGF2R DOMAINS 11-12 | CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR |
1LYA | P07339 | CRYSTAL STRUCTURES OF NATIVE AND INHIBITED FORMS OF HUMAN CATHEPSIN D: IMPLICATIONS FOR LYSOSOMAL TARGETING AND DRUG DESIGN | CATHEPSIN D (E.C.3.4.23.5) |
2IUF | 2IUF | The structures of Penicillium vitale catalase: resting state, oxidised state (compound I) and complex with aminotriazole | CATALASE (E.C.1.11.1.6) |
2HGO | P84902 | NMR structure of Cassiicolin | CASSIICOLIN |
1QMU | Q90240 | Duck carboxypeptidase D domain II | CARBOXYPEPTIDASE GP180 RESIDUES 503-882 |
6H04 | P01031 | Closed conformation of the Membrane Attack Complex | C9, Complement C5,Complement C5, Complement component C8 beta chain, Complement component C7, Complement component C8 gamma chain, Complement component C8 alpha chain, Complement component C6 |
6H04 | P13671 | Closed conformation of the Membrane Attack Complex | C9, Complement C5,Complement C5, Complement component C8 beta chain, Complement component C7, Complement component C8 gamma chain, Complement component C8 alpha chain, Complement component C6 |
6H04 | P07358 | Closed conformation of the Membrane Attack Complex | C9, Complement C5,Complement C5, Complement component C8 beta chain, Complement component C7, Complement component C8 gamma chain, Complement component C8 alpha chain, Complement component C6 |
6H04 | P10643 | Closed conformation of the Membrane Attack Complex | C9, Complement C5,Complement C5, Complement component C8 beta chain, Complement component C7, Complement component C8 gamma chain, Complement component C8 alpha chain, Complement component C6 |
6H04 | P07360 | Closed conformation of the Membrane Attack Complex | C9, Complement C5,Complement C5, Complement component C8 beta chain, Complement component C7, Complement component C8 gamma chain, Complement component C8 alpha chain, Complement component C6 |
6H04 | P07357 | Closed conformation of the Membrane Attack Complex | C9, Complement C5,Complement C5, Complement component C8 beta chain, Complement component C7, Complement component C8 gamma chain, Complement component C8 alpha chain, Complement component C6 |
6H04 | P02748 | Closed conformation of the Membrane Attack Complex | C9, Complement C5,Complement C5, Complement component C8 beta chain, Complement component C7, Complement component C8 gamma chain, Complement component C8 alpha chain, Complement component C6 |
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Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
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Last updated: August 19, 2024