GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | January 07, 2026 |
| PDB ID | UniProt ID | Title | Descriptor ▲ |
|---|---|---|---|
| 6MZJ | 6MZJ | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MYY | Q6PJF2 | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MYY | S6C4S0 | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MZJ | Q6PJF2 | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MYY | 6MYY | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MZJ | S6C4S0 | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MZJ | 6MZJ | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MZJ | S6C4S0 | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MZJ | Q6PJF2 | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 2 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MYY | Q6PJF2 | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6MYY | 6MYY | Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer, 3 Fabs bound, sharpened map | 426c DS-SOSIP D3, VRC01GL light chain, VRC01GL heavy chain |
| 6VO0 | Q2N0S6 | BG505 SOSIP.v5.2 in complex with rabbit Fab 43A2 | 43A2 light chain, 43A2 heavy chain, Envelope glycoprotein gp120, Envelope glycoprotein gp41 |
| 6VO0 | 6VO0 | BG505 SOSIP.v5.2 in complex with rabbit Fab 43A2 | 43A2 light chain, 43A2 heavy chain, Envelope glycoprotein gp120, Envelope glycoprotein gp41 |
| 5D6C | 5D6C | Structure of 4497 Fab bound to synthetic wall teichoic acid fragment | 4497 antibody IgK (VL and CL), 4497 antibody IgG1 (VH and CH1) |
| 1O75 | P29723 | Tp47, the 47-Kilodalton Lipoprotein of Treponema pallidum | 47 KDA MEMBRANE ANTIGEN |
| 6IRS | Q01650 | human LAT1-4F2hc complex incubated with JPH203 | 4F2 cell-surface antigen heavy chain, Large neutral amino acids transporter small subunit 1 |
| 6IRT | Q01650 | human LAT1-4F2hc complex bound with BCH | 4F2 cell-surface antigen heavy chain, Large neutral amino acids transporter small subunit 1 |
| 6IRS | J3KPF3 | human LAT1-4F2hc complex incubated with JPH203 | 4F2 cell-surface antigen heavy chain, Large neutral amino acids transporter small subunit 1 |
| 6IRT | J3KPF3 | human LAT1-4F2hc complex bound with BCH | 4F2 cell-surface antigen heavy chain, Large neutral amino acids transporter small subunit 1 |
| 7CMI | J3KPF3 | The LAT2-4F2hc complex in complex with leucine | 4F2 cell-surface antigen heavy chain, Large neutral amino acids transporter small subunit 2 |
| 7CMH | J3KPF3 | The LAT2-4F2hc complex in complex with tryptophan | 4F2 cell-surface antigen heavy chain, Large neutral amino acids transporter small subunit 2 |
| 7CMH | Q9UHI5 | The LAT2-4F2hc complex in complex with tryptophan | 4F2 cell-surface antigen heavy chain, Large neutral amino acids transporter small subunit 2 |
| 7CMI | Q9UHI5 | The LAT2-4F2hc complex in complex with leucine | 4F2 cell-surface antigen heavy chain, Large neutral amino acids transporter small subunit 2 |
| 6I1A | A0A254TQT9 | Crystal structure of rutinosidase from Aspergillus niger | 5'(3')-deoxyribonucleotidase, cytosolic type (E.C.3.1.3.-) |
| 6GSZ | I0AZ41 | Crystal structure of native alfa-L-rhamnosidase from Aspergillus terreus | 5'(3')-deoxyribonucleotidase, cytosolic type (E.C.3.1.3.-) |
| 4H1S | P21589 | Crystal Structure of a Truncated Soluble form of Human CD73 with Ecto-5'-Nucleotidase activity | 5'-nucleotidase (E.C.3.1.3.5) |
| 6HXW | 6HXW | structure of human CD73 in complex with antibody IPH53 | 5'-nucleotidase (E.C.3.1.3.5), IPH53 heavy chain, IPH53 light chain |
| 6HXW | P21589 | structure of human CD73 in complex with antibody IPH53 | 5'-nucleotidase (E.C.3.1.3.5), IPH53 heavy chain, IPH53 light chain |
| 5M8R | P17643 | Crystal structure of human tyrosinase related protein 1 (T391V-R374S-Y362F) in complex with mimosine | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8Q | P17643 | Crystal structure of human tyrosinase related protein 1 mutant (T391V-R374S-Y362F) in complex with kojic acid | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8M | P17643 | Crystal structure of human tyrosinase related protein 1 in complex with kojic acid | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8O | P17643 | Crystal structure of human tyrosinase related protein 1 in complex with tropolone | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8S | P17643 | Crystal structure of human tyrosinase related protein 1 mutant (T391V-R374S-Y362F) in complex with phenylthiourea (PTU) | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8N | P17643 | Crystal structure of human tyrosinase related protein 1 in complex with mimosine | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 5M8T | P17643 | Crystal structure of human tyrosinase related protein 1 (T391V-R374S-Y362F) in complex with tropolone | 5,6-dihydroxyindole-2-carboxylic acid oxidase (E.C.1.14.18.-) |
| 6W1J | Q8K1F4 | Cryo-EM structure of 5HT3A receptor in presence of Alosetron | 5-hydroxytryptamine receptor 3A |
| 6W1M | Q8K1F4 | Cryo-EM structure of 5HT3A receptor in presence of Ondansetron | 5-hydroxytryptamine receptor 3A |
| 6BE1 | E9QLC0 | Cryo-EM structure of serotonin receptor | 5-hydroxytryptamine receptor 3A |
| 6NP0 | E9QLC0 | Cryo-EM structure of 5HT3A receptor in presence of granisetron | 5-hydroxytryptamine receptor 3A |
| 6W1Y | Q8K1F4 | Cryo-EM structure of 5HT3A receptor in presence of Palonosetron | 5-hydroxytryptamine receptor 3A |
| 6DG7 | E9QLC0 | Full-length 5-HT3A receptor in a serotonin-bound conformation- State 1 | 5-hydroxytryptamine receptor 3A |
| 6DG8 | E9QLC0 | Full-length 5-HT3A receptor in a serotonin-bound conformation- State 2 | 5-hydroxytryptamine receptor 3A |
| 5IWL | Q08722 | CD47-diabody complex | 5F9 diabody, Leukocyte surface antigen CD47 |
| 5IWL | 5IWL | CD47-diabody complex | 5F9 diabody, Leukocyte surface antigen CD47 |
| 1UP7 | 1UP7 | Structure of the 6-phospho-beta glucosidase from Thermotoga maritima at 2.4 Angstrom resolution in the tetragonal form with NAD and glucose-6-phosphate | 6-PHOSPHO-BETA-GLUCOSIDASE (E.C.3.2.1.6) |
| 1UP7 | Q9X108 | Structure of the 6-phospho-beta glucosidase from Thermotoga maritima at 2.4 Angstrom resolution in the tetragonal form with NAD and glucose-6-phosphate | 6-PHOSPHO-BETA-GLUCOSIDASE (E.C.3.2.1.6) |
| 1UP7 | 1UP7 | Structure of the 6-phospho-beta glucosidase from Thermotoga maritima at 2.4 Angstrom resolution in the tetragonal form with NAD and glucose-6-phosphate | 6-PHOSPHO-BETA-GLUCOSIDASE (E.C.3.2.1.6) |
| 1UP7 | Q9X108 | Structure of the 6-phospho-beta glucosidase from Thermotoga maritima at 2.4 Angstrom resolution in the tetragonal form with NAD and glucose-6-phosphate | 6-PHOSPHO-BETA-GLUCOSIDASE (E.C.3.2.1.6) |
| 5AJW | Q16875 | Human PFKFB3 in complex with an indole inhibitor 2 | 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE 3 (E.C.2.7.1.105, 2.7.1.105, 3.1.3.46) |
| 5AJX | Q16875 | Human PFKFB3 in complex with an indole inhibitor 3 | 6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE 3 (E.C.2.7.1.105, 2.7.1.105, 3.1.3.46) |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
This work is licensed under Creative Commons Attribution 4.0 International
GlyCosmos Portal v4.4.0
Last updated: December 8, 2025