GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
Source | Last Updated |
---|---|
GlycoNAVI Proteins | November 28, 2024 |
PDB ID | UniProt ID ▲ | Title | Descriptor |
---|---|---|---|
4UAU | P95649 | Crystal structure of CbbY (mutant D10N) from Rhodobacter sphaeroides in complex with Xylulose-(1,5)bisphosphate, crystal form II | |
6KIF | P95822 | Structure of cyanobacterial photosystem I-IsiA-flavodoxin supercomplex | Chlorophyll a-b binding protein 8, chloroplastic, Chlorophyll a-b binding protein, chloroplastic, Light harvesting chlorophyll a/b-binding protein Lhcb6, CP24, Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, PsbF, Photosystem II reaction center protein H, Photosystem II reaction center protein I, PsbI, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Oxygen-evolving enhancer protein 1, chloroplastic, Oxygen-evolving enhancer protein 2, chloroplastic, Oxygen-evolving enhancer protein 3, Light harvesting chlorophyll a/b-binding protein Lhcb4, CP29, Light harvesting chlorophyll a/b-binding protein Lhcb5, CP26, Photosystem II reaction center protein T, Photosystem II reaction center protein W, PSBW, Photosystem II reaction center protein X, Photosystem II reaction center protein Z |
6KIG | P95822 | Structure of cyanobacterial photosystem I-IsiA supercomplex | Photosystem I P700 chlorophyll a apoprotein A1 (E.C.1.97.1.12), Photosystem I P700 chlorophyll a apoprotein A2 (E.C.1.97.1.12), Photosystem I iron-sulfur center (E.C.1.97.1.12), Photosystem I reaction center subunit II, Photosystem I reaction center subunit IV, Photosystem I reaction center subunit III, Photosystem I PsaI protein, Photosystem I reaction center subunit IX, Photosystem I reaction center subunit PsaK, Photosystem I reaction center subunit XI, PsaM, Iron stress-induced chlorophyll-binding protein |
6KIF | P95823 | Structure of cyanobacterial photosystem I-IsiA-flavodoxin supercomplex | Chlorophyll a-b binding protein 8, chloroplastic, Chlorophyll a-b binding protein, chloroplastic, Light harvesting chlorophyll a/b-binding protein Lhcb6, CP24, Photosystem II protein D1 (E.C.1.10.3.9), Photosystem II CP47 reaction center protein, Photosystem II CP43 reaction center protein, Photosystem II D2 protein (E.C.1.10.3.9), Cytochrome b559 subunit alpha, Cytochrome b559 subunit beta, PsbF, Photosystem II reaction center protein H, Photosystem II reaction center protein I, PsbI, Photosystem II reaction center protein J, Photosystem II reaction center protein K, Photosystem II reaction center protein L, Photosystem II reaction center protein M, Oxygen-evolving enhancer protein 1, chloroplastic, Oxygen-evolving enhancer protein 2, chloroplastic, Oxygen-evolving enhancer protein 3, Light harvesting chlorophyll a/b-binding protein Lhcb4, CP29, Light harvesting chlorophyll a/b-binding protein Lhcb5, CP26, Photosystem II reaction center protein T, Photosystem II reaction center protein W, PSBW, Photosystem II reaction center protein X, Photosystem II reaction center protein Z |
6KIG | P95823 | Structure of cyanobacterial photosystem I-IsiA supercomplex | Photosystem I P700 chlorophyll a apoprotein A1 (E.C.1.97.1.12), Photosystem I P700 chlorophyll a apoprotein A2 (E.C.1.97.1.12), Photosystem I iron-sulfur center (E.C.1.97.1.12), Photosystem I reaction center subunit II, Photosystem I reaction center subunit IV, Photosystem I reaction center subunit III, Photosystem I PsaI protein, Photosystem I reaction center subunit IX, Photosystem I reaction center subunit PsaK, Photosystem I reaction center subunit XI, PsaM, Iron stress-induced chlorophyll-binding protein |
2VR5 | P95868 | Crystal structure of Trex from Sulfolobus Solfataricus in complex with acarbose intermediate and glucose | |
3DH4 | P96169 | Crystal Structure of Sodium/Sugar symporter with bound Galactose from vibrio parahaemolyticus | |
4DOE | P96311 | The liganded structure of Cbescii CelA GH9 module | |
2QKX | P96382 | N-acetyl glucosamine 1-phosphate uridyltransferase from Mycobacterium tuberculosis complex with N-acetyl glucosamine 1-phosphate | |
3ST8 | P96382 | Crystal structure of GlmU from Mycobacterium tuberculosis in complex with COENZYME A, GLUCOSAMINE 1-PHOSPHATE and URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE | |
4G3S | P96382 | Crystal structure of GlmU from Mycobacterium tuberculosis in complex with uridine-diphosphate-n-acetylglucosamine and pyrophosphate Snapshot 2 | |
4HCQ | P96382 | Crystal structure of GLMU from mycobacterium tuberculosis in complex with glucosamine-1-phosphate | |
4K6R | P96382 | Crystal structure of GlmU in complex with ATP | |
1PN3 | P96558 | Crystal Structure of TDP-epi-Vancosaminyltransferase GtfA in complexes with TDP and the acceptor substrate DVV. | GLYCOSYLTRANSFERASE GTFA, DESVANCOSAMINYL VANCOMYCIN |
1PN3 | P96558 | Crystal Structure of TDP-epi-Vancosaminyltransferase GtfA in complexes with TDP and the acceptor substrate DVV. | GLYCOSYLTRANSFERASE GTFA, DESVANCOSAMINYL VANCOMYCIN |
1PNV | P96558 | Crystal Structure of TDP-epi-Vancosaminyltransferase GtfA in complexes with TDP and Vancomycin | GLYCOSYLTRANSFERASE GTFA, VANCOMYCIN |
1PNV | P96558 | Crystal Structure of TDP-epi-Vancosaminyltransferase GtfA in complexes with TDP and Vancomycin | GLYCOSYLTRANSFERASE GTFA, VANCOMYCIN |
8B70 | P96589 | KimA from B. subtilis with nucleotide second-messenger c-di-AMP bound | |
3TB6 | P96711 | Structure of the effector-binding domain of arabinose repressor AraR from Bacillus subtilis | |
2IYO | P96789 | Structural characterization of a bacterial 6PDH reveals aspects of specificity, mechanism and mode of inhibition | |
2IYP | P96789 | product rup | |
2IYP | P96789 | product rup | |
1GA8 | P96945 | CRYSTAL STRUCTURE OF GALACOSYLTRANSFERASE LGTC IN COMPLEX WITH DONOR AND ACCEPTOR SUGAR ANALOGS. | |
6DM8 | P97287 | Understanding the Species Selectivity of Myeloid cell leukemia-1 (Mcl-1) inhibitors | |
4GZ9 | P97333 | Mouse Neuropilin-1, extracellular domains 1-4 (a1a2b1b2) | |
8ODZ | P97378 | Cryo-EM structure of a pre-dimerized murine IL-12 complete extracellular signaling complex (Class 1). | |
8OE0 | P97378 | Cryo-EM structure of a pre-dimerized murine IL-12 complete extracellular signaling complex (Class 2). | |
8PB1 | P97378 | Cryo-EM structure of a pre-dimerized murine IL-12 complete extracellular signaling complex (Class 1), obtained after local refinement. | |
6W7B | P97438 | K2P2.1 (TREK-1), 0 mM K+ | |
6W8C | P97438 | K2P2.1 (TREK-1):ML335 complex, 1 mM K+ | |
6W7C | P97438 | K2P2.1 (TREK-1), 1 mM K+ | |
6W82 | P97438 | K2P2.1 (TREK-1), 50 mM K+ | |
2WV3 | P97546 | Neuroplastin-55 binds to and signals through the fibroblast growth factor receptor | NEUROPLASTIN |
2WV3 | P97546 | Neuroplastin-55 binds to and signals through the fibroblast growth factor receptor | NEUROPLASTIN |
6F2T | P97675 | Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) | |
6F2Y | P97675 | Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) in complex with Ap4A | |
6F33 | P97675 | Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) in complex with AMPNPP | |
6F2V | P97675 | Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) in complex with AMP | |
6F30 | P97675 | Crystal structure of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) in complex with UDPGlcNAc | |
6G4G | P97675 | Full length ectodomain of ectonucleotide phosphodiesterase/pyrophosphatase-3 (NPP3) including the SMB domains but with a partially disordered active site structure | |
3MJ7 | P97792 | Crystal structure of the complex of JAML and Coxsackie and Adenovirus receptor, CAR | Junctional adhesion molecule-like, Coxsackievirus and adenovirus receptor homolog |
6Z3M | P97798 | Repulsive Guidance Molecule B (RGMB) in complex with Growth Differentiation Factor 5 (GDF5) and Neogenin 1 (NEO1). | |
4BQ6 | P97798 | Crystal structure of the RGMB-NEO1 complex form 1 | NEOGENIN, RGM DOMAIN FAMILY MEMBER B |
4BQ8 | P97798 | Crystal structure of the RGMB-NEO1 complex form 3 | NEOGENIN, RGM DOMAIN FAMILY MEMBER B |
4BQ9 | P97798 | Crystal structure of the FN5 and FN6 domains of NEO1, form 1 | NEOGENIN |
4BQB | P97798 | Crystal structure of the FN5 and FN6 domains of NEO1, form 2 | NEOGENIN |
4BQC | P97798 | Crystal structure of the FN5 and FN6 domains of NEO1 bound to SOS | NEOGENIN |
4PLN | P97798 | Crystal Structure of Chicken Netrin-1 (LN-LE3) complexed with mouse Neogenin (FN4-5) | |
4UI2 | P97798 | Crystal structure of the ternary RGMB-BMP2-NEO1 complex | NEOGENIN, BONE MORPHOGENETIC PROTEIN 2, BMP2, REPULSIVE GUIDANCE MOLECULE C, RGMC, HEMOJUVELIN |
3EHB | P98002 | A D-Pathway Mutation Decouples the Paracoccus Denitrificans Cytochrome c Oxidase by Altering the side chain orientation of a distant, conserved Glutamate |
GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.
Supported by JST NBDC Grant Number JPMJND2204
Partly supported by NIH Common Fund Grant #1U01GM125267-01
GlyCosmos Portal v4.0.0
Last updated: August 19, 2024