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GlycoNAVI Proteins
GlycoNAVI-Proteins is dataset of glycan and protein information. This is the content of GlycoNAVI.
| Source | Last Updated |
|---|---|
| GlycoNAVI Proteins | November 28, 2024 |
| PDB ID | UniProt ID | Title ▲ | Descriptor |
|---|---|---|---|
| 7JZL | P0DTC2 | SARS-CoV-2 spike in complex with LCB1 (2RBDs open) | Spike glycoprotein,LCB1 |
| 7JZL | 7JZL | SARS-CoV-2 spike in complex with LCB1 (2RBDs open) | Spike glycoprotein,LCB1 |
| 7JZU | 7JZU | SARS-CoV-2 spike in complex with LCB1 (local refinement of the RBD and LCB1) | LCB1,Spike glycoprotein |
| 7JZU | P0DTC2 | SARS-CoV-2 spike in complex with LCB1 (local refinement of the RBD and LCB1) | LCB1,Spike glycoprotein |
| 7JZN | P0DTC2 | SARS-CoV-2 spike in complex with LCB3 (2RBDs open) | Spike glycoprotein,LCB3 |
| 7JZN | 7JZN | SARS-CoV-2 spike in complex with LCB3 (2RBDs open) | Spike glycoprotein,LCB3 |
| 7JZM | 7JZM | SARS-CoV-2 spike in complex with LCB3 (local refinement of the RBD and LCB3) | LCB3,spike glycoprotein |
| 7JZM | P0DTC2 | SARS-CoV-2 spike in complex with LCB3 (local refinement of the RBD and LCB3) | LCB3,spike glycoprotein |
| 7KSG | P0DTC2 | SARS-CoV-2 spike in complex with nanobodies E | SARS-CoV-2 spike glycoprotein, Nanobody against SARS-CoV-2 glycoprotein |
| 7KSG | 7KSG | SARS-CoV-2 spike in complex with nanobodies E | SARS-CoV-2 spike glycoprotein, Nanobody against SARS-CoV-2 glycoprotein |
| 8HGL | P0DTC2 | SARS-CoV-2 spike in complex with neutralizing antibody NIV-11 | |
| 8HGL | 8HGL | SARS-CoV-2 spike in complex with neutralizing antibody NIV-11 | |
| 7YH7 | P0DTC2 | SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 (state 2) | |
| 7YH7 | 7YH7 | SARS-CoV-2 spike in complex with neutralizing antibody NIV-8 (state 2) | |
| 8C89 | P0DTC2 | SARS-CoV-2 spike in complex with the 17T2 neutralizing antibody Fab fragment (local refinement of RBD and Fab) | |
| 8C89 | 8C89 | SARS-CoV-2 spike in complex with the 17T2 neutralizing antibody Fab fragment (local refinement of RBD and Fab) | |
| 7E3C | P0DTC2 | SARS-CoV-2 spike in complex with the Ab1 neutralizing antibody (focused refinement on Fab-RBD) | |
| 7E3C | 7E3C | SARS-CoV-2 spike in complex with the Ab1 neutralizing antibody (focused refinement on Fab-RBD) | |
| 7E39 | P0DTC2 | SARS-CoV-2 spike in complex with the Ab4 neutralizing antibody (State 3) | |
| 7E39 | 7E39 | SARS-CoV-2 spike in complex with the Ab4 neutralizing antibody (State 3) | |
| 7E23 | P0DTC2 | SARS-CoV-2 spike in complex with the CA521 neutralizing antibody Fab (focused refinement on Fab-RBD) | Spike protein S1, CA521 Heavy Chain, CA521 Light Chain |
| 7E23 | 7E23 | SARS-CoV-2 spike in complex with the CA521 neutralizing antibody Fab (focused refinement on Fab-RBD) | Spike protein S1, CA521 Heavy Chain, CA521 Light Chain |
| 7JVC | P0DTC2 | SARS-CoV-2 spike in complex with the S2A4 neutralizing antibody Fab fragment | SARS-CoV-2 spike glycoprotein, S2A4 Fab heavy chain, S2A4 Fab light chain |
| 7JVC | 7JVC | SARS-CoV-2 spike in complex with the S2A4 neutralizing antibody Fab fragment | SARS-CoV-2 spike glycoprotein, S2A4 Fab heavy chain, S2A4 Fab light chain |
| 7JVA | P0DTC2 | SARS-CoV-2 spike in complex with the S2A4 neutralizing antibody Fab fragment (local refinement of the receptor-binding domain and Fab variable domains) | S2A4 Fab heavy chain, S2A4 Fab light chain, SARS-CoV-2 spike glycoprotein |
| 7JVA | 7JVA | SARS-CoV-2 spike in complex with the S2A4 neutralizing antibody Fab fragment (local refinement of the receptor-binding domain and Fab variable domains) | S2A4 Fab heavy chain, S2A4 Fab light chain, SARS-CoV-2 spike glycoprotein |
| 7R7N | P0DTC2 | SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment (local refinement of the RBD and S2D106) | |
| 7R7N | 7R7N | SARS-CoV-2 spike in complex with the S2D106 neutralizing antibody Fab fragment (local refinement of the RBD and S2D106) | |
| 7K4N | P0DTC2 | SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment | Spike glycoprotein, S2E12 neutralizing antibody Fab fragment (heavy chain), S2E12 neutralizing antibody Fab fragment (light chain) |
| 7K4N | 7K4N | SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment | Spike glycoprotein, S2E12 neutralizing antibody Fab fragment (heavy chain), S2E12 neutralizing antibody Fab fragment (light chain) |
| 7K45 | P0DTC2 | SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment (local refinement of the RBD and Fab variable domains) | |
| 7K45 | 7K45 | SARS-CoV-2 spike in complex with the S2E12 neutralizing antibody Fab fragment (local refinement of the RBD and Fab variable domains) | |
| 7JV6 | P0DTC2 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (closed conformation) | SARS-CoV-2 spike glycoprotein, S2H13 Fab heavy chain, S2H13 Fab light chain |
| 7JV6 | 7JV6 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (closed conformation) | SARS-CoV-2 spike glycoprotein, S2H13 Fab heavy chain, S2H13 Fab light chain |
| 7JV4 | P0DTC2 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (one RBD open) | |
| 7JV4 | 7JV4 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (one RBD open) | |
| 7TAS | P0DTC2 | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (local refinement of the RBD and S2K146) | |
| 7TAS | 7TAS | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (local refinement of the RBD and S2K146) | |
| 7TAT | P0DTC2 | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (two receptor-binding domains open) | |
| 7TAT | 7TAT | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (two receptor-binding domains open) | |
| 7K43 | P0DTC2 | SARS-CoV-2 spike in complex with the S2M11 neutralizing antibody Fab fragment | SARS-CoV-2 spike glycoprotein, S2M11 Fab fragment (heavy chain), S2M11 Fab fragment (light chain) |
| 7K43 | 7K43 | SARS-CoV-2 spike in complex with the S2M11 neutralizing antibody Fab fragment | SARS-CoV-2 spike glycoprotein, S2M11 Fab fragment (heavy chain), S2M11 Fab fragment (light chain) |
| 7JW0 | P0DTC2 | SARS-CoV-2 spike in complex with the S304 neutralizing antibody Fab fragment | SARS-CoV-2 spike glycoprotein, S304 Fab light chain, S304 Fab heavy chain |
| 7JW0 | 7JW0 | SARS-CoV-2 spike in complex with the S304 neutralizing antibody Fab fragment | SARS-CoV-2 spike glycoprotein, S304 Fab light chain, S304 Fab heavy chain |
| 7WHD | P0DTC2 | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d) | |
| 7WHD | 7WHD | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (2u1d) | |
| 7WHB | P0DTC2 | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U) | |
| 7WHB | 7WHB | SARS-CoV-2 spike in complex with the ZB8 neutralizing antibody Fab (3U) | |
| 6ZOW | P0DTC2 | SARS-CoV-2 spike in prefusion state | |
| 6ZP5 | P0DTC2 | SARS-CoV-2 spike in prefusion state (flexibility analysis, 1-up closed conformation) |
