GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source Last Updated
Reactome March 20, 2024
ECODAB April 1, 2019
Displaying entries 76 - 100 of 128 in total
Pathway Name Protein Name UniProt ID Gene Symbol Organism GlyTouCan ID
Response to elevated platelet cytosolic Ca2+
  • DDB_G0288795
  • akt
  • dagA
  • pkbA
Dictyostelium discoideum
Lysosomal oligosaccharide catabolism
  • DDB_G0275917
  • manA
  • manB
  • manC
  • manD
  • manE
  • manF
  • manG
Dictyostelium discoideum
Neddylation
  • DDB_G0269686
  • DDB_G0270220
  • DDB_G0271372
  • DDB_G0272016
  • DDB_G0272218
  • DDB_G0272666
  • DDB_G0272951
  • DDB_G0277011
  • DDB_G0277249
  • DDB_G0278671
  • DDB_G0279093
  • DDB_G0280581
  • DDB_G0280895
  • DDB_G0284157
  • DDB_G0284369
  • DDB_G0285813
  • DDB_G0286387
  • DDB_G0286565
  • DDB_G0288453
  • DDB_G0288597
  • DDB_G0289099
  • DDB_G0290025
  • DDB_G0291902
  • DDB_G0292144
  • DDB_G0292302
  • M4
  • appbp1
  • cand1
  • cdcD
  • cnrM
  • commd1
  • commd10
  • commd2
  • commd3
  • commd4
  • commd5
  • commd6
  • commd7
  • commd8
  • csn1
  • csn2
  • csn3
  • csn4
  • csn5
  • csn6
  • csn7
  • csn8
  • cul1
  • cul2
  • cul3
  • cul4
  • cul5
  • culA
  • culB
  • culC
  • culD
  • culE
  • dapA
  • ddb1
  • dpr1
  • ercc8
  • fp21A
  • fp21B
  • fpa1
  • fpa1A
  • fpa1B
  • fpa2
  • fpaA
  • fpaB-1
  • fpaB-2
  • hbx1
  • mtpn
  • nae1
  • nedd8
  • npl4
  • nploc4
  • prdD
  • prdE
  • prtC
  • prtD
  • psmA1
  • psmA2
  • psmA3
  • psmA4
  • psmA5
  • psmA6
  • psmA7
  • psmB2
  • psmB3
  • psmB4-1
  • psmB4-2
  • psmB5
  • psmB6
  • psmB7
  • psmC1
  • psmC2
  • psmC3
  • psmC4
  • psmC6
  • psmD1
  • psmD10
  • psmD11
  • psmD12
  • psmD13
  • psmD14
  • psmD2
  • psmD3
  • psmD4
  • psmD6
  • psmD7
  • psmD8-1
  • psmD8-2
  • psmD9
  • psmE3
  • psmE4
  • psmF1
  • rbbD
  • rbbE
  • rbx1
  • repE
  • skp1A
  • skp1B
  • sks1
  • tbp2
  • tbpB
  • tceb1
  • triA
  • uba3
  • ube1c
  • ube2m
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • ubxd7
  • uch1
  • uchl
  • ufd1
  • veg116
  • warA
  • wdr23
  • wdr5
  • wdr68
  • wdsof1
  • wri
Dictyostelium discoideum
Linoleic acid (LA) metabolism
  • DDB_G0270312
  • DDB_G0271066
  • DDB_G0272012
  • DDB_G0274669
  • DDB_G0277569
  • DDB_G0288001
  • abcD3
  • eloA
  • fcsA
  • fcsB
  • sre1
Dictyostelium discoideum
Synthesis of dolichyl-phosphate-glucose
  • alg5
  • dgtA
Dictyostelium discoideum
Keratan sulfate degradation
  • glb1
  • hexa1
  • hexa2
  • hexb1
  • hexb2
  • nagA
  • nagE
Dictyostelium discoideum
Cam-PDE 1 activation
  • Pde4
  • calA
  • calB
  • camA
  • mlcD
  • pde2
  • pde3
  • regA
Dictyostelium discoideum
Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol
  • DDB_G0268562
  • abcB2
  • abcB3
  • abcB6
  • abcB7
  • acox1
  • alrA
  • alrB
  • alrC
  • mfe2
  • mfeB
  • tagA
  • tagB
  • tagC
  • tagD
Dictyostelium discoideum
Post-translational modification: synthesis of GPI-anchored proteins
  • DDB_G0279675
  • DDB_G0288963
  • pldG
  • xpnpep1
  • xpnpepl
  • xpnpepl1
Dictyostelium discoideum
Orc1 removal from chromatin
  • DDB_G0272951
  • M4
  • cul2
  • culB
  • dapA
  • dpr1
  • fp21A
  • fp21B
  • fpa1
  • fpa1A
  • fpa1B
  • fpa2
  • fpaA
  • fpaB-1
  • fpaB-2
  • orc1
  • orcA
  • prdD
  • prdE
  • prtC
  • prtD
  • psmA1
  • psmA2
  • psmA3
  • psmA4
  • psmA5
  • psmA6
  • psmA7
  • psmB2
  • psmB3
  • psmB4-1
  • psmB4-2
  • psmB5
  • psmB6
  • psmB7
  • psmC1
  • psmC2
  • psmC3
  • psmC4
  • psmC6
  • psmD1
  • psmD10
  • psmD11
  • psmD12
  • psmD13
  • psmD14
  • psmD2
  • psmD3
  • psmD4
  • psmD6
  • psmD7
  • psmD8-1
  • psmD8-2
  • psmD9
  • psmE3
  • psmE4
  • psmF1
  • rbx1
  • skp1A
  • skp1B
  • sks1
  • tbp2
  • tbpB
  • ubqB
  • ubqC
  • ubqF
  • ubqG
  • ubqH
  • ubqI
  • ubqJ
  • ubqO
  • veg116
Dictyostelium discoideum
Ion influx/efflux at host-pathogen interface
  • nramp
  • nramp1
  • slc11a1
Dictyostelium discoideum
G alpha (i) signalling events
  • DDB_G0270858
  • DDB_G0273033
  • DDB_G0278897
  • DDB_G0282583
  • DDB_G0286173
  • DDB_G0286817
  • GluPR
  • gpa9
  • gpaI
  • gpbA
  • grlE
  • grlP
  • grlQ
Dictyostelium discoideum
Clathrin-mediated endocytosis
  • DDB_G0267588
  • DDB_G0271676
  • DDB_G0271812
  • DDB_G0272638
  • DDB_G0274261
  • DDB_G0274695
  • DDB_G0279059
  • DDB_G0279493
  • DDB_G0280377
  • DDB_G0281155
  • DDB_G0281235
  • DDB_G0286115
  • DDB_G0286699
  • DDB_G0292190
  • DDB_G0292610
  • PIPkinA
  • abcC1
  • abcC13
  • abcC14
  • abcC15
  • abcC2
  • abcC6
  • abcC7
  • abcC9
  • ap1b1
  • ap2a1-1
  • ap2a1-2
  • ap2s1
  • apm1
  • apm2
  • apmA
  • chcA
  • clc
  • clcA
  • clmA
  • eps15
  • gacBB
  • lmpC
  • mgp1
  • mrrA
  • pik1
  • pik2
  • pik3
  • pikA
  • pikB
  • pikC
  • pikF
  • pikG
  • pikH
  • sybA
  • sybB
Dictyostelium discoideum
Neurotransmitter clearance
  • D2
  • DDB_G0276969
  • DDB_G0279717
  • DDB_G0285555
  • DDB_G0291344
  • cryS
Dictyostelium discoideum
Progressive trimming of alpha-1,2-linked mannose residues from Man9/8/7GlcNAc2 to produce Man5GlcNAc2
  • DDB_G0268754
  • DDB_G0284391
  • DDB_G0284393
  • DDB_G0284395
  • DDB_G0292918
Dictyostelium discoideum
G alpha (s) signalling events
  • Pde4
  • pde2
  • pde3
  • regA
Dictyostelium discoideum
Glycolysis
  • enoA
  • enoB
  • fba
  • g6pi
  • glk
  • gniA
  • gnpda1
  • gpdA
  • gpi
  • gpmA
  • nagB2
  • pgam
  • pgi
  • pgkA
  • pgmB
  • pyk
  • tpiA
Dictyostelium discoideum
Thyroxine biosynthesis
  • noxA
  • noxB
  • noxC
  • poxA
Dictyostelium discoideum
RAF activation
  • DDB_G0267566
  • DDB_G0267686
  • DDB_G0268876
  • DDB_G0272092
  • DDB_G0282963
  • DDB_G0290471
  • DDB_G0291516
  • DDB_G0291664
  • RacGEF
  • kxcB
  • mrkC
  • phg2
  • spkA-1
  • spkA-2
Dictyostelium discoideum
Choline catabolism
  • DDB_G0276821
  • DDB_G0288717
  • chdh
  • ctl2
  • slc44a2
Dictyostelium discoideum
Nitric oxide stimulates guanylate cyclase
  • redB
Dictyostelium discoideum
Glycerophospholipid biosynthesis
  • SK
  • SPHK
  • cpnA
  • cpnB-1
  • cpnB-2
  • cpnC
  • cpnD
  • cpnE
  • cpnF
  • sgkA
  • sgkB
  • sgkC
  • sgkD
Dictyostelium discoideum
Sphingolipid catabolism
  • DDB_G0271516
  • DDB_G0275547
  • DDB_G0284367
  • comG
  • dcd3A
  • sglA
  • sppA
Dictyostelium discoideum
Toll Like Receptor 4 (TLR4) Cascade
  • DDB_G0271242
  • DDB_G0288095
  • DDB_G0288097
Dictyostelium discoideum
Hyaluronan biosynthesis and export
  • DDB_G0270636
  • DDB_G0287365
Dictyostelium discoideum

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GlyCosmos is a member of the GlySpace Alliance together with GlyGen and Glycomics@ExPASy.

Acknowledgements

Supported by JST NBDC Grant Number JPMJND2204

Partly supported by NIH Common Fund Grant #1U01GM125267-01


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Last updated: August 19, 2024