GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **51 - 75** of **250** in total

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Pathway Name	Protein Name ▼	UniProt ID	Gene Symbol	Organism	GlyTouCan ID
COPI-independent Golgi-to-ER retrograde traffic	Lysophospholipase 1 Lysophospholipase 2 Lysophospholipase 3 Protein MUM3 Putative meiotic phospholipase SPO1	P39105 P53541 Q03674 Q08108 Q08750	MUM3 PLB1 PLB2 PLB3 SPO1	Saccharomyces cerevisiae (brewer's yeast)
Platelet sensitization by LDL	Lysophospholipase 1 Lysophospholipase 2 Lysophospholipase 3 Mitogen-activated protein kinase HOG1 Putative meiotic phospholipase SPO1	P32485 P39105 P53541 Q03674 Q08108	HOG1 PLB1 PLB2 PLB3 SPO1 SSK3	Saccharomyces cerevisiae (brewer's yeast)
phospho-PLA2 pathway	Lysophospholipase 1 Lysophospholipase 2 Lysophospholipase 3 Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Putative meiotic phospholipase SPO1 Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P39105 P41808 P53541 Q00772 Q03674 Q08108	DAC2 FUS3 KSS1 MPK1 PLB1 PLB2 PLB3 SLT2 SMK1 SPO1	Saccharomyces cerevisiae (brewer's yeast)
Acyl chain remodelling of PI	Lysophospholipase 1 Lysophospholipase 2 Lysophospholipase 3 Lysophospholipid acyltransferase Putative meiotic phospholipase SPO1	P39105 P53541 Q03674 Q08108 Q08548	ALE1 LCA1 LPT1 PLB1 PLB2 PLB3 SLC4 SPO1	Saccharomyces cerevisiae (brewer's yeast)
Acyl chain remodelling of PC	Lysophospholipase 1 Lysophospholipase 2 Lysophospholipase 3 Lysophospholipid acyltransferase Putative meiotic phospholipase SPO1	P39105 P53541 Q03674 Q08108 Q08548	ALE1 LCA1 LPT1 PLB1 PLB2 PLB3 SLC4 SPO1	Saccharomyces cerevisiae (brewer's yeast)
Acyl chain remodelling of PS	Lysophospholipase 1 Lysophospholipase 2 Lysophospholipase 3 Lysophospholipid acyltransferase Oxysterol-binding protein homolog 4 Oxysterol-binding protein homolog 5 Oxysterol-binding protein homolog 6 Oxysterol-binding protein homolog 7 Putative meiotic phospholipase SPO1	P35843 P35844 P38755 P39105 P53541 Q02201 Q03674 Q08108 Q08548	ALE1 BSR3 HES1 KES1 LCA1 LPT1 OSH4 OSH5 OSH6 OSH7 PLB1 PLB2 PLB3 SLC4 SPO1	Saccharomyces cerevisiae (brewer's yeast)
SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription	Kexin	P13134	KEX2 QDS1	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of IP2, IP, and Ins in the cytosol	Inositol monophosphatase 1 Inositol monophosphatase 2 Inositol-3-phosphate synthase Phosphatidylinositol 4,5-bisphosphate 5-phosphatase INP54 Polyphosphatidylinositol phosphatase INP53	P11986 P38710 Q05533 Q08227 Q12271	IMP1 IMP2 INM1 INM2 INO1 INP53 INP54 SJL3 SOP2	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of IPs in the nucleus	Inositol hexakisphosphate kinase 1 Inositol polyphosphate multikinase	P07250 Q12494	ARG82 ARGR3 GSL3 IPK2 KCS1	Saccharomyces cerevisiae (brewer's yeast)
Amino acid transport across the plasma membrane	High-affinity methionine permease Low-affinity methionine permease Oligo-1,6-glucosidase IMA2 Oligo-1,6-glucosidase IMA3 Oligo-1,6-glucosidase IMA4 Probable transporter MCH2 Probable transporter MCH4 Riboflavin transporter MCH5 Uncharacterized transporter ESBP6 Vacuolar amino acid transporter 2 Vacuolar amino acid transporter 4	P0CW40 P0CW41 P36032 P38734 P39981 P50276 P50944 P53918 Q08268 Q08295 Q08777	AVT2 AVT4 ESBP6 FSP2 IMA2 IMA3 IMA4 MCH2 MCH3 MCH4 MCH5 MUP1 MUP3	Saccharomyces cerevisiae (brewer's yeast)
Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding	Guanine nucleotide-binding protein subunit beta T-complex protein 1 subunit alpha T-complex protein 1 subunit beta T-complex protein 1 subunit delta T-complex protein 1 subunit epsilon T-complex protein 1 subunit eta T-complex protein 1 subunit gamma T-complex protein 1 subunit theta T-complex protein 1 subunit zeta	P12612 P18851 P39076 P39077 P39078 P39079 P40413 P42943 P47079	ANC2 BIN2 BIN3 CCT1 CCT2 CCT3 CCT4 CCT5 CCT6 CCT7 CCT8 STE4 TCP1 TCP2 TCP20 TCP3 TCP4 TCP5 TCP6	Saccharomyces cerevisiae (brewer's yeast)
G alpha (i) signalling events	Guanine nucleotide-binding protein alpha-2 subunit Protein SST2 Regulator of G-protein signaling 2	P10823 P11972 Q99188	GPA2 RGS2 SSP101 SST2	Saccharomyces cerevisiae (brewer's yeast)
ADP signalling through P2Y purinoceptor 1	Guanine nucleotide-binding protein alpha-1 subunit Lysophospholipase 1 Lysophospholipase 2 Lysophospholipase 3 Mitogen-activated protein kinase HOG1 Putative meiotic phospholipase SPO1	P08539 P32485 P39105 P53541 Q03674 Q08108	CDC70 DAC1 GPA1 HOG1 PLB1 PLB2 PLB3 SCG1 SPO1 SSK3	Saccharomyces cerevisiae (brewer's yeast)
Phosphate bond hydrolysis by NTPDase proteins	Golgi apyrase Guanosine-diphosphatase	P32621 P40009	GDA1 YND1	Saccharomyces cerevisiae (brewer's yeast)
Pyruvate metabolism	Glyoxalase I Hydroxyacylglutathione hydrolase, mitochondrial Mitochondrial outer membrane protein porin 1 Mitochondrial outer membrane protein porin 2 Probable alanine aminotransferase, mitochondrial Pyruvate carboxylase 1 Pyruvate kinase 1 Pyruvate kinase 2 Uncharacterized mitochondrial hydrolase FMP41	P00549 P04840 P11154 P40478 P50107 P52489 P52893 P53889 Q12320	ALT1 CDC19 FMP41 GER1 GLO1 GLO4 OMP2 POR1 POR2 PYC1 PYK1 PYK2 PYV VDAC1	Saccharomyces cerevisiae (brewer's yeast)
Glycogen breakdown (glycogenolysis)	Glycogen debranching enzyme Glycogen phosphorylase Glycogenin-1 Glycogenin-2 IME2-dependent-signaling protein Phosphoglucomutase 1 Phosphoglucomutase 2	P06738 P33401 P36143 P37012 P46958 P47011 Q06625	GA-5 GAL5 GDB1 GLG1 GLG2 GPH1 IDS2 PGM1 PGM2	Saccharomyces cerevisiae (brewer's yeast)	G58161NS
Aflatoxin activation and detoxification	Glutathione hydrolase proenzyme	Q05902	CIS2 ECM38	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of Leukotrienes (LT) and Eoxins (EX)	Glutathione hydrolase proenzyme Leucine aminopeptidase 2 Oligomycin resistance ATP-dependent permease YOR1	P53049 Q05902 Q10740	CIS2 ECM38 LAP2 YOR1 YRS1	Saccharomyces cerevisiae (brewer's yeast)
TP53 Regulates Metabolic Genes	Glucose-6-phosphate 1-dehydrogenase Glucose-6-phosphate isomerase Glutathione reductase Peroxiredoxin AHP1 Peroxiredoxin TSA1 Peroxiredoxin TSA2 Thioredoxin-1 Thioredoxin-2 Thioredoxin-3, mitochondrial	P11412 P12709 P22217 P22803 P25372 P34760 P38013 P41921 Q04120	AHP1 GLR1 MET19 PGI1 TPX1 TRX1 TRX2 TRX3 TSA TSA1 TSA2 ZRG14 ZWF1	Saccharomyces cerevisiae (brewer's yeast)
Oxidative Stress Induced Senescence	General control transcription factor GCN4 General transcriptional corepressor CYC8 Histone H2A.1 Histone H2A.2 Histone H2A.Z Histone H2B.1 Histone H2B.2 Histone H3-like centromeric protein CSE4 Histone H3 Histone H4 Mitogen-activated protein kinase HOG1 Serine/threonine-protein kinase STE11 Thioredoxin-1 Thioredoxin-2 Thioredoxin-3, mitochondrial	P02293 P02294 P02309 P03069 P04911 P04912 P14922 P22217 P22803 P23561 P25372 P32485 P36012 P61830 Q12692	AAS101 AAS3 ARG9 CRT8 CSE4 CSL2 CYC8 GCN4 H2A1 H2A2 H2AZ H2B1 H2B2 HHF1 HHF2 HHT1 HHT2 HOG1 HTA1 HTA2 HTA3 HTB1 HTB2 HTZ1 SIN2 SPT11 SPT12 SSK3 SSN6 STE11 TRX1 TRX2 TRX3	Saccharomyces cerevisiae (brewer's yeast)
RAB GEFs exchange GTP for GDP on RABs	GTP-binding protein YPT10 GTP-binding protein YPT11 GTP-binding protein YPT1 GTP-binding protein YPT52 GTP-binding protein YPT53 GTP-binding protein YPT6 Guanine nucleotide exchange factor subunit RGP1 Guanine nucleotide exchange factor subunit RIC1 Protein MUK1 Rab GDP-dissociation inhibitor Rab guanine nucleotide exchange factor SEC2 Rab proteins geranylgeranyltransferase component A Ras-related protein SEC4 TRAPP-associated protein TCA17 Trafficking protein particle complex II-specific subunit 120 Trafficking protein particle complex II-specific subunit 130 Trafficking protein particle complex subunit 20 Trafficking protein particle complex subunit 23 Trafficking protein particle complex subunit 31 Trafficking protein particle complex subunit 33 Trafficking protein particle complex subunit BET3 Trafficking protein particle complex subunit BET5 Vacuolar fusion protein CCZ1 Vacuolar fusion protein MON1 Vacuolar protein sorting-associated protein 21 Vacuolar protein sorting-associated protein 9 Ypt/Rab-type GTPase YPT7	P01123 P07560 P16664 P17065 P32613 P32864 P32939 P36017 P36018 P36019 P36149 P38146 P38273 P38334 P39958 P40395 P48559 P53129 P54787 Q02866 Q03337 Q03630 Q03660 Q03784 Q04183 Q99260 Q99394	AUT11 AUT12 BET3 BET5 CCZ1 CVT16 GDI1 MON1 MRS6 MSI4 MUK1 RGP1 RIC1 SEC19 SEC2 SEC4 SRO6 TCA17 TRS120 TRS130 TRS20 TRS23 TRS31 TRS33 VAM4 VPS12 VPS21 VPS9 VPT12 VPT9 YP2 YPT1 YPT10 YPT11 YPT21 YPT51 YPT52 YPT53 YPT6 YPT7	Saccharomyces cerevisiae (brewer's yeast)
RAB geranylgeranylation	GTP-binding protein YPT10 GTP-binding protein YPT11 GTP-binding protein YPT1 GTP-binding protein YPT31/YPT8 GTP-binding protein YPT32/YPT11 GTP-binding protein YPT52 GTP-binding protein YPT53 GTP-binding protein YPT6 Geranylgeranyl transferase type-2 subunit alpha Geranylgeranyl transferase type-2 subunit beta Rab proteins geranylgeranyltransferase component A Ras-related protein SEC4 Uncharacterized protein YHR022C Vacuolar protein sorting-associated protein 21 Ypt/Rab-type GTPase YPT7	P01123 P07560 P20133 P32864 P32939 P36017 P36018 P36019 P38146 P38555 P38763 P48559 P51996 Q00618 Q99260	BET2 BET4 MRS6 MSI4 SEC4 SRO6 VAM4 VPS12 VPS21 VPT12 YHR022C YP2 YPT1 YPT10 YPT11 YPT21 YPT31 YPT32 YPT51 YPT52 YPT53 YPT6 YPT7 YPT8	Saccharomyces cerevisiae (brewer's yeast)
RHOF GTPase cycle	GTP-binding protein RHO1 GTP-binding protein RHO2 GTP-binding protein RHO3 GTP-binding protein RHO4 GTPase-activating protein BEM2/IPL2 GTPase-activating protein BEM3 Protein ECM25 RHO GTPase-activating protein RGD1 Rho-type GTPase-activating protein 1 Rho-type GTPase-activating protein 2 Uncharacterized protein YHR182W	P06780 P06781 P32525 P32873 P38339 P38870 P39083 P39960 Q00245 Q00246 Q06407	BEM2 BEM3 DBM1 ECM25 IPL2 RGA1 RGA2 RGD1 RHO1 RHO2 RHO3 RHO4 SUP9 THE1 YHR182W	Saccharomyces cerevisiae (brewer's yeast)
MTOR signalling	GTP-binding protein GTR1 GTP-binding protein GTR2 Rheb-like protein RHB1	P25378 P53290 Q00582	GTR1 GTR2 RHB1 RSG1	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of glycosylphosphatidylinositol (GPI)	GPI ethanolamine phosphate transferase 1 GPI ethanolamine phosphate transferase 2 GPI mannosyltransferase 2 GPI mannosyltransferase 3 GPI mannosyltransferase 4 GPI-anchored wall transfer protein 1 Glycosylphosphatidylinositol anchor biosynthesis protein 11 N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase	P23797 P30777 P36051 P38211 P40367 P47026 Q04174 Q06636	FSR2 GPI10 GPI11 GPI12 GPI18 GPI7 GWT1 LAS2 LAS21 MCD4 SAP2 SMP3 SSU21 ZRG16	Saccharomyces cerevisiae (brewer's yeast)

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