GlyCosmos Portal

GlyCosmos Pathways

Integrated of pathway data, containing glycoproteins and glycans obtained from Reactome and the Metabolism of carbohydrates in Escherichia coli O-antigens obtained from ECODAB. Search by pathway name, species, and protein name.

Source	Last Updated
Reactome	March 20, 2024
ECODAB	April 1, 2019

Displaying entries **76 - 100** of **250** in total

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Pathway Name	Protein Name ▼	UniProt ID	Gene Symbol	Organism
Class I peroxisomal membrane protein import	Fatty aldehyde dehydrogenase HFD1 Mitochondrial fission 1 protein Outer mitochondrial transmembrane helix translocase Peroxisomal biogenesis factor 3 Peroxisomal long-chain fatty acid import protein 1 Peroxisomal long-chain fatty acid import protein 2 Peroxisomal membrane protein PEX13 Peroxisomal membrane protein PEX14 Peroxisomal membrane protein PMP27 Peroxisomal membrane protein import receptor PEX19 Peroxisome assembly protein 12	P28737 P28795 P34230 P40515 P41909 P53112 P80667 Q04370 Q04458 Q07418 Q12462	FIS1 HFD1 MDV2 MSP1 PAL1 PAS12 PAS20 PAS3 PAT1 PAT2 PEX11 PEX12 PEX13 PEX14 PEX19 PEX3 PMP24 PMP27 PXA1 PXA2 SSH2 YTA4	Saccharomyces cerevisiae (brewer's yeast)
RND1 GTPase cycle	Fatty aldehyde dehydrogenase HFD1 GTP-binding protein RHO1 GTP-binding protein RHO2 GTP-binding protein RHO3 GTP-binding protein RHO4 Heat shock protein STI1 Inhibitory regulator protein BUD2/CLA2 Inhibitory regulator protein IRA1 Inhibitory regulator protein IRA2 Putative zinc metalloprotease TRE2 Ras-like protein 2 Uncharacterized protein TRE1 Vacuolar protein sorting-associated protein 70 tRNA (34-2'-O)-methyltransferase regulator RTT10	P01120 P06780 P06781 P15705 P18963 P19158 P33314 P47161 Q00245 Q00246 Q04458 Q08693 Q08919 Q08924	ASC1 BUD2 CCS1 CLA2 CTN5 ERC25 ERE2 GLC1 GLC4 GLC5 HFD1 IRA1 IRA2 PPD1 RAS2 RHO1 RHO2 RHO3 RHO4 RTT10 STI1 TRE1 TRE2 TRM734 VPS70	Saccharomyces cerevisiae (brewer's yeast)
Linoleic acid (LA) metabolism	Fatty acid elongase 1 Fatty acid elongase 2 Fatty acid elongase 3 Peroxisomal long-chain fatty acid import protein 2	P25358 P39540 P40319 P41909	APA1 ELO1 ELO2 ELO3 FEN1 GNS1 PAL1 PAT2 PXA1 SRE1 SSH2 SUR4 VBM1 VBM2	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of very long-chain fatty acyl-CoAs	Fatty acid elongase 1 Fatty acid elongase 2 Fatty acid elongase 3 Long-chain-fatty-acid--CoA ligase 1 Long-chain-fatty-acid--CoA ligase 2 Long-chain-fatty-acid--CoA ligase 3 Long-chain-fatty-acid--CoA ligase 4 Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PHS1 Very-long-chain enoyl-CoA reductase	P25358 P30624 P39002 P39518 P39540 P40319 P40857 P47912 Q99190	APA1 ELO1 ELO2 ELO3 FAA1 FAA2 FAA3 FAA4 FAM1 FEN1 GNS1 PHS1 SRE1 SUR4 TSC13 VBM1 VBM2	Saccharomyces cerevisiae (brewer's yeast)
RHOD GTPase cycle	F-actin-capping protein subunit beta GTP-binding protein RHO1 GTP-binding protein RHO2 GTP-binding protein RHO3 GTP-binding protein RHO4 GTPase-activating protein BEM2/IPL2 GTPase-activating protein BEM3 Protein ECM25 RHO GTPase-activating protein RGD1 Rho-type GTPase-activating protein 1 Rho-type GTPase-activating protein 2 Serine/threonine-protein kinase CLA4 Serine/threonine-protein kinase SKM1 Serine/threonine-protein kinase STE20 Uncharacterized protein YHR182W Ypt/Rab-type GTPase YPT7	P06780 P06781 P13517 P32525 P32873 P32939 P38339 P38870 P39083 P39960 P48562 Q00245 Q00246 Q03497 Q06407 Q12469	BEM2 BEM3 CAP2 CLA4 DBM1 ECM25 IPL2 RGA1 RGA2 RGD1 RHO1 RHO2 RHO3 RHO4 SKM1 STE20 SUP9 THE1 VAM4 YHR182W YPT7	Saccharomyces cerevisiae (brewer's yeast)
Transcriptional and post-translational regulation of MITF-M expression and activity	Exportin-1 Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Protein kinase MCK1 Retrograde regulation protein 3 Serine/threonine-protein kinase MRK1 Serine/threonine-protein kinase RIM11/MSD1 Serine/threonine-protein kinase YPK3 Sporulation-specific mitogen-activated protein kinase SMK1	P14681 P16892 P21965 P30822 P38070 P38165 P38615 P41808 P50873 Q00772	CRM1 DAC2 FUS3 GSK3 KAP124 KSS1 MCK1 MDS1 MPK1 MRK1 RIM11 RTG3 SLT2 SMK1 XPO1 YPK1 YPK3	Saccharomyces cerevisiae (brewer's yeast)
Recycling of eIF2:GDP	Eukaryotic translation initiation factor 2 subunit alpha Eukaryotic translation initiation factor 2 subunit beta Eukaryotic translation initiation factor 2 subunit gamma Translation initiation factor eIF2B subunit alpha Translation initiation factor eIF2B subunit beta Translation initiation factor eIF2B subunit delta Translation initiation factor eIF2B subunit epsilon Translation initiation factor eIF2B subunit gamma	P09032 P09064 P12754 P14741 P20459 P32481 P32501 P32502	AAS2 GCD1 GCD11 GCD2 GCD6 GCD7 GCN3 SUI2 SUI3 SUI4 TIF211 TIF212 TIF213 TIF221 TIF222 TIF223 TIF224 TIF225 TRA3	Saccharomyces cerevisiae (brewer's yeast)
Formation of the ternary complex, and subsequently, the 43S complex	Eukaryotic translation initiation factor 1A Eukaryotic translation initiation factor 2 subunit alpha Eukaryotic translation initiation factor 2 subunit beta Eukaryotic translation initiation factor 2 subunit gamma Eukaryotic translation initiation factor 3 subunit A Eukaryotic translation initiation factor 3 subunit B Eukaryotic translation initiation factor 3 subunit C Eukaryotic translation initiation factor 3 subunit G Eukaryotic translation initiation factor 3 subunit I Eukaryotic translation initiation factor 3 subunit J Small ribosomal subunit protein eS10A Small ribosomal subunit protein eS10B Small ribosomal subunit protein eS12 Small ribosomal subunit protein eS17A Small ribosomal subunit protein eS17B Small ribosomal subunit protein eS19A Small ribosomal subunit protein eS1B Small ribosomal subunit protein eS21B Small ribosomal subunit protein eS24A Small ribosomal subunit protein eS24B Small ribosomal subunit protein eS25A Small ribosomal subunit protein eS26A Small ribosomal subunit protein eS27A Small ribosomal subunit protein eS27B Small ribosomal subunit protein eS28B Small ribosomal subunit protein eS4A Small ribosomal subunit protein eS4B Small ribosomal subunit protein eS6A Small ribosomal subunit protein eS6B Small ribosomal subunit protein eS7A Small ribosomal subunit protein eS8A Small ribosomal subunit protein eS8B Small ribosomal subunit protein uS10 Small ribosomal subunit protein uS11B Small ribosomal subunit protein uS12A Small ribosomal subunit protein uS12B Small ribosomal subunit protein uS13A Small ribosomal subunit protein uS13B Small ribosomal subunit protein uS14A Small ribosomal subunit protein uS15 Small ribosomal subunit protein uS17A Small ribosomal subunit protein uS17B Small ribosomal subunit protein uS19 Small ribosomal subunit protein uS2A Small ribosomal subunit protein uS3 Small ribosomal subunit protein uS4A Small ribosomal subunit protein uS4B Small ribosomal subunit protein uS5 Small ribosomal subunit protein uS7 Small ribosomal subunit protein uS8A Small ribosomal subunit protein uS9A Small ribosomal subunit protein uS9B Ubiquitin-ribosomal protein eS31 fusion protein	O13516 P02407 P05750 P05755 P05756 P05759 P06103 P07280 P09064 P0C0W1 P0C0X0 P0CX29 P0CX30 P0CX31 P0CX32 P0CX35 P0CX36 P0CX37 P0CX38 P0CX39 P0CX40 P0CX47 P0CX48 P0CX51 P0CX52 P0CX55 P0CX56 P14127 P20459 P23248 P25443 P26783 P26786 P32481 P32497 P32905 P35997 P38249 P38701 P38711 P38912 P39516 P39938 P40217 P41057 P46784 P48589 Q01855 Q04067 Q05775 Q08745 Q3E754 Q3E792	CDC63 CRY2 GCD11 HCR1 NAB1 NAB1A NIP1 PLC2 PRT1 RP51A RP51B RP55A RP61R RPG1 RPS0A RPS101 RPS102 RPS10A RPS10B RPS11A RPS11B RPS12 RPS13 RPS13A RPS13B RPS13C RPS14A RPS14B RPS15 RPS16A RPS16AA RPS16B RPS17A RPS17B RPS18A RPS18B RPS19A RPS1B RPS2 RPS20 RPS21 RPS21B RPS22A RPS23A RPS23B RPS24 RPS24A RPS24B RPS24EA RPS24EB RPS25A RPS25B RPS26 RPS26A RPS26B RPS27A RPS27B RPS28A RPS28B RPS29A RPS3 RPS30 RPS31 RPS31A RPS33B RPS36A RPS37 RPS4 RPS4A RPS4B RPS5 RPS6A RPS6B RPS7A RPS7B RPS8A RPS8B RPS9A RPS9B SUF14 SUI2 SUI3 SUI4 SUP38 SUP44 SUP46 TIF11 TIF211 TIF212 TIF213 TIF32 TIF34 TIF35 UBI3 URP2 YS11A YS29A YST1	Saccharomyces cerevisiae (brewer's yeast)
Eukaryotic Translation Termination	Eukaryotic peptide chain release factor GTP-binding subunit Eukaryotic peptide chain release factor subunit 1 Multifunctional methyltransferase subunit TRM112 eRF1 methyltransferase catalytic subunit MTQ2	P05453 P12385 P53738 Q03920	GST1 MTC6 MTQ2 PNM2 SAL3 SAL4 SUF12 SUP1 SUP2 SUP35 SUP45 TRM112	Saccharomyces cerevisiae (brewer's yeast)
mTORC1-mediated signalling	Eukaryotic initiation factor 4F subunit p150 Eukaryotic translation initiation factor 4B FK506-binding protein 1 Nucleolar protein 13 Serine/threonine-protein kinase YPK3 Small ribosomal subunit protein eS6A Small ribosomal subunit protein eS6B	P0CX37 P0CX38 P20081 P34167 P38070 P39935 P53883	FKB1 FPR1 NOP13 RBP1 RPS101 RPS102 RPS10A RPS10B RPS6A RPS6B STM1 TIF3 TIF42 TIF4631 YPK3	Saccharomyces cerevisiae (brewer's yeast)
Transport of bile salts and organic acids, metal ions and amine compounds	Ethionine resistance-conferring protein 1 Uncharacterized transporter YDR338C	P38767 Q05497	ERC1 YDR338C	Saccharomyces cerevisiae (brewer's yeast)
Sodium/Proton exchangers	Endosomal/prevacuolar sodium/hydrogen exchanger	Q04121	NHA2 NHX1 VPL27 VPS44	Saccharomyces cerevisiae (brewer's yeast)
Regulation of HSF1-mediated heat shock response	Endoplasmic reticulum chaperone BiP Heat shock protein SSA1 Heat shock protein SSA2 Heat shock protein SSA3 Heat shock protein SSA4 Heat shock protein homolog SSE1 Heat shock protein homolog SSE2 Heat shock transcription factor Import motor subunit, mitochondrial Mitogen-activated protein kinase FUS3 Mitogen-activated protein kinase KSS1 Mitogen-activated protein kinase SLT2/MPK1 Nucleoporin ASM4 Nucleoporin NDC1 Nucleoporin NIC96 Nucleoporin NSP1 Nucleoporin NUP116/NSP116 Nucleoporin NUP120 Nucleoporin NUP133 Nucleoporin NUP170 Nucleoporin NUP188 Nucleoporin NUP192 Nucleoporin NUP1 Nucleoporin NUP2 Nucleoporin NUP42 Nucleoporin NUP57 Nucleoporin NUP82 Nucleoporin NUP84 Nucleoporin NUP85 Nucleoporin SEH1 Protein BMH2 Protein MLP1 Protein OPI10 Protein kinase MCK1 Protein transport protein SEC13 Ran-specific GTPase-activating protein 1 Ran-specific GTPase-activating protein 2 Ribosome-associated molecular chaperone SSB1 Ribosome-associated molecular chaperone SSB2 Serine/threonine-protein kinase MRK1 Serine/threonine-protein kinase RIM11/MSD1 Sporulation-specific mitogen-activated protein kinase SMK1 Zuotin mRNA export factor GLE2	P09435 P0CS90 P10591 P10592 P10961 P11484 P14681 P14907 P16474 P16892 P20676 P21965 P22202 P32499 P32500 P32527 P32589 P32590 P34077 P34730 P35729 P36161 P38181 P38615 P40066 P40150 P40368 P40517 P41808 P41920 P46673 P47054 P48837 P49686 P50873 P52593 P52891 P53011 Q00772 Q02455 Q02630 Q04491 Q05166 Q08202	ANU3 ASM4 BMH2 CST20 DAC2 ENS1 FUS3 GLE2 GRP78 GSK3 HSF1 HSP HTN1 KAR2 KSS1 MCK1 MDS1 MLP1 MPK1 MRK1 MSI3 NDC1 NIC96 NLE3 NSP1 NSP116 NUP1 NUP116 NUP120 NUP133 NUP170 NUP188 NUP192 NUP2 NUP42 NUP57 NUP59 NUP82 NUP84 NUP85 OPI10 RAE1 RAT2 RAT3 RAT9 RIM11 RIP1 SEC13 SEH1 SFO1 SLT2 SMK1 SSA1 SSA2 SSA3 SSA4 SSB1 SSB2 SSC1 SSD1 SSE1 SSE2 UIP1 YG101 YG103 YPK1 YRB1 YRB2 ZUO1	Saccharomyces cerevisiae (brewer's yeast)
Glycerophospholipid catabolism	Ectonucleotide pyrophosphatase/phosphodiesterase 1 Ectonucleotide pyrophosphatase/phosphodiesterase 2 Lysophospholipase NTE1	P25353 P39997 Q04958	NPP1 NPP2 NTE1	Saccharomyces cerevisiae (brewer's yeast)
Glycosphingolipid catabolism	Ectonucleotide pyrophosphatase/phosphodiesterase 1 Ectonucleotide pyrophosphatase/phosphodiesterase 2 Inositol phosphosphingolipids phospholipase C	P25353 P39997 P40015	ISC1 NPP1 NPP2	Saccharomyces cerevisiae (brewer's yeast)
Vitamin B2 (riboflavin) metabolism	Ectonucleotide pyrophosphatase/phosphodiesterase 1 Ectonucleotide pyrophosphatase/phosphodiesterase 2 Flavin adenine dinucleotide synthase Riboflavin kinase	P25353 P38913 P39997 Q03778	FAD1 FMN1 NPP1 NPP2	Saccharomyces cerevisiae (brewer's yeast)
Regulation of pyruvate metabolism	E3 ubiquitin-protein ligase RMD5 Glucose-induced degradation protein 7 Glucose-induced degradation protein 8 Polyubiquitin Protein FYV10 Pyruvate kinase 1 Pyruvate kinase 2 Vacuolar import and degradation protein 28 Vacuolar import and degradation protein 30	P00549 P0CG63 P25569 P40208 P40492 P40547 P52489 P53076 Q12508	CDC19 DCR1 FYV10 GID1 GID2 GID5 GID7 GID8 GID9 MOH2 PYK1 PYK2 RMD5 SCD2 UBI4 VID28 VID30	Saccharomyces cerevisiae (brewer's yeast)
SUMOylation of chromatin organization proteins	E3 SUMO-protein ligase SIZ1 Histone H4 Histone deacetylase HDA1 Histone deacetylase RPD3 Nucleoporin ASM4 Nucleoporin NDC1 Nucleoporin NIC96 Nucleoporin NSP1 Nucleoporin NUP116/NSP116 Nucleoporin NUP120 Nucleoporin NUP133 Nucleoporin NUP170 Nucleoporin NUP188 Nucleoporin NUP192 Nucleoporin NUP1 Nucleoporin NUP2 Nucleoporin NUP42 Nucleoporin NUP57 Nucleoporin NUP82 Nucleoporin NUP84 Nucleoporin NUP85 Nucleoporin SEH1 Protein MLP1 Protein transport protein SEC13 Ran-specific GTPase-activating protein 1 Ran-specific GTPase-activating protein 2 SUMO-conjugating enzyme UBC9 SWI/SNF global transcription activator complex subunit SWP82 Ubiquitin-like protein SMT3 mRNA export factor GLE2	P02309 P14907 P20676 P32499 P32500 P32561 P34077 P35729 P36161 P38181 P40066 P40368 P40517 P41920 P43554 P46673 P47054 P48837 P49686 P50623 P52593 P52891 P53011 P53973 Q02455 Q02630 Q04195 Q04491 Q05166 Q12306	ANU3 ASM4 CST20 GLE2 HDA1 HHF1 HHF2 HTN1 MLP1 MOF6 NDC1 NIC96 NLE3 NSP1 NSP116 NUP1 NUP116 NUP120 NUP133 NUP170 NUP188 NUP192 NUP2 NUP42 NUP57 NUP59 NUP82 NUP84 NUP85 RAE1 RAT2 RAT3 RAT9 REC3 RIP1 RPD3 SDI2 SDS6 SEC13 SEH1 SFO1 SIZ1 SMT3 SWP82 UBC9 UIP1 ULL1 YRB1 YRB2	Saccharomyces cerevisiae (brewer's yeast)
SUMOylation of SUMOylation proteins	E3 SUMO-protein ligase SIZ1 E3 SUMO-protein ligase SIZ2 Nucleoporin ASM4 Nucleoporin NDC1 Nucleoporin NIC96 Nucleoporin NSP1 Nucleoporin NUP116/NSP116 Nucleoporin NUP120 Nucleoporin NUP133 Nucleoporin NUP170 Nucleoporin NUP188 Nucleoporin NUP192 Nucleoporin NUP1 Nucleoporin NUP2 Nucleoporin NUP42 Nucleoporin NUP57 Nucleoporin NUP82 Nucleoporin NUP84 Nucleoporin NUP85 Nucleoporin SEH1 Protein MLP1 Protein transport protein SEC13 Ran-specific GTPase-activating protein 1 Ran-specific GTPase-activating protein 2 SUMO-conjugating enzyme UBC9 Ubiquitin-like protein SMT3 mRNA export factor GLE2	P14907 P20676 P32499 P32500 P34077 P35729 P36161 P38181 P40066 P40368 P40517 P41920 P46673 P47054 P48837 P49686 P50623 P52593 P52891 P53011 Q02455 Q02630 Q04195 Q04491 Q05166 Q12216 Q12306	ANU3 ASM4 CST20 GLE2 HTN1 MLP1 NDC1 NFI1 NIC96 NLE3 NSP1 NSP116 NUP1 NUP116 NUP120 NUP133 NUP170 NUP188 NUP192 NUP2 NUP42 NUP57 NUP59 NUP82 NUP84 NUP85 RAE1 RAT2 RAT3 RAT9 RIP1 SEC13 SEH1 SFO1 SIZ1 SIZ2 SMT3 UBC9 UIP1 ULL1 YRB1 YRB2	Saccharomyces cerevisiae (brewer's yeast)
Apoptotic execution phase	Dynamin-related protein DNM1 Endoplasmic reticulum transmembrane protein 3 Serine/threonine-protein kinase KIC1	P38692 P54861 Q07451	DNM1 KIC1 NRK1 YET3	Saccharomyces cerevisiae (brewer's yeast)
Regulation of Apoptosis	Dynamin-like GTPase MGM1, mitochondrial Mitochondrial metalloendopeptidase OMA1 Vacuolar protein sorting-associated protein 1	P21576 P32266 P36163	LAM1 MDM17 MGM1 OMA1 SPO15 VPS1	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of dolichyl-phosphate-glucose	Dolichyl-phosphate beta-glucosyltransferase	P40350	ALG5	Saccharomyces cerevisiae (brewer's yeast)
Synthesis of pyrophosphates in the cytosol	Diphosphoinositol polyphosphate phosphohydrolase DDP1 Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase Inositol hexakisphosphate kinase 1 Inositol polyphosphate multikinase	P07250 Q06685 Q12494 Q99321	ARG82 ARGR3 DDP1 GSL3 IPK2 KCS1 VIP1	Saccharomyces cerevisiae (brewer's yeast)
Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)	Dipeptidyl aminopeptidase B	P18962	DAP2	Saccharomyces cerevisiae (brewer's yeast)
Wax biosynthesis	Diacylglycerol O-acyltransferase 1	Q08650	DGA1	Saccharomyces cerevisiae (brewer's yeast)

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