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AQP4 aquaporin 4 [ Sus scrofa (pig) ]

Gene ID: 100126277, updated on 3-Dec-2024

Summary

Official Symbol
AQP4provided by VGNC
Official Full Name
aquaporin 4provided by VGNC
Primary source
VGNC:VGNC:85432
See related
Ensembl:ENSSSCG00000035965
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Biased expression in psoas major muscle (RPKM 12.8), mixtures (RPKM 11.5) and 2 other tissues See more
Orthologs
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Genomic context

See AQP4 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (111407632..111422169, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (104387592..104394409, complement)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene potassium channel tetramerization domain containing 1 Neighboring gene uncharacterized LOC100514905 Neighboring gene uncharacterized LOC110261186 Neighboring gene carbohydrate sulfotransferase 9 Neighboring gene 60S ribosomal protein L36 pseudogene

Genomic regions, transcripts, and products

Bibliography

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in basolateral plasma membrane PubMed 
located_in plasma membrane PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001110423.1NP_001103893.1  aquaporin-4

    See identical proteins and their annotated locations for NP_001103893.1

    Status: PROVISIONAL

    Source sequence(s)
    EU165525
    UniProtKB/TrEMBL
    A0A286ZY85, A8V978
    Related
    ENSSSCP00000047998.3, ENSSSCT00000051496.3
    Conserved Domains (1) summary
    pfam00230
    Location:9226
    MIP; Major intrinsic protein

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    111407632..111422169 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021093187.1XP_020948846.1  aquaporin-4 isoform X1

    UniProtKB/TrEMBL
    A0A287AVU9, A0A8D0LP14, A0A8D0T2X0
    Related
    ENSSSCP00000040033.2, ENSSSCT00000050372.2
    Conserved Domains (1) summary
    pfam00230
    Location:31248
    MIP; Major intrinsic protein
  2. XM_021093190.1XP_020948849.1  aquaporin-4 isoform X2

    UniProtKB/TrEMBL
    A0A286ZY85, A0A4X1VLV1
    Conserved Domains (1) summary
    pfam00230
    Location:9226
    MIP; Major intrinsic protein
  3. XM_021093195.1XP_020948854.1  aquaporin-4 isoform X2

    UniProtKB/TrEMBL
    A0A286ZY85, A0A4X1VLV1
    Conserved Domains (1) summary
    pfam00230
    Location:9226
    MIP; Major intrinsic protein
  4. XM_021093188.1XP_020948847.1  aquaporin-4 isoform X2

    UniProtKB/TrEMBL
    A0A286ZY85, A0A4X1VLV1
    Related
    ENSSSCP00000036599.2, ENSSSCT00000036862.3
    Conserved Domains (1) summary
    pfam00230
    Location:9226
    MIP; Major intrinsic protein
  5. XM_021093189.1XP_020948848.1  aquaporin-4 isoform X2

    UniProtKB/TrEMBL
    A0A286ZY85, A0A4X1VLV1
    Conserved Domains (1) summary
    pfam00230
    Location:9226
    MIP; Major intrinsic protein
  6. XM_021093191.1XP_020948850.1  aquaporin-4 isoform X2

    UniProtKB/TrEMBL
    A0A286ZY85, A0A4X1VLV1
    Related
    ENSSSCP00000056358.2, ENSSSCT00000042661.2
    Conserved Domains (1) summary
    pfam00230
    Location:9226
    MIP; Major intrinsic protein
  7. XM_021093193.1XP_020948852.1  aquaporin-4 isoform X2

    UniProtKB/TrEMBL
    A0A286ZY85, A0A4X1VLV1
    Conserved Domains (1) summary
    pfam00230
    Location:9226
    MIP; Major intrinsic protein
  8. XM_021093192.1XP_020948851.1  aquaporin-4 isoform X2

    UniProtKB/TrEMBL
    A0A286ZY85, A0A4X1VLV1
    Conserved Domains (1) summary
    pfam00230
    Location:9226
    MIP; Major intrinsic protein
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