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PYGO2 pygopus family PHD finger 2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100391179, updated on 8-Mar-2024

Summary

Gene symbol
PYGO2
Gene description
pygopus family PHD finger 2
See related
Ensembl:ENSCJAG00000009336
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
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Genomic context

See PYGO2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 18 NC_071459.1 (8937187..8941401, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 18 NC_048400.1 (8945037..8949889, complement)

Chromosome 18 - NC_071459.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA40 Neighboring gene PBX homeobox interacting protein 1 Neighboring gene uncharacterized LOC128930128 Neighboring gene SHC adaptor protein 1 Neighboring gene CDC28 protein kinase regulatory subunit 1B

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071459.1 Reference mCalJa1.2.pat.X

    Range
    8937187..8941401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035278968.2XP_035134859.1  pygopus homolog 2

    UniProtKB/TrEMBL
    U3CP49
    Conserved Domains (2) summary
    TIGR01628
    Location:160242
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd15636
    Location:328381
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)
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