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chid1 chitinase domain containing 1 [ Anolis carolinensis (green anole) ]

Gene ID: 100567831, updated on 8-Mar-2024

Summary

Gene symbol
chid1
Gene description
chitinase domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Orthologs
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Genomic context

See chid1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 1 NC_085841.1 (264415987..264550104, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 1 NC_014776.1 (72568254..72701275)

Chromosome 1 - NC_085841.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase II, I and III subunit L Neighboring gene tetraspanin 4 Neighboring gene uncharacterized LOC134297782 Neighboring gene uncharacterized LOC134297793 Neighboring gene mucin-2-like Neighboring gene integumentary mucin A.1-like Neighboring gene adaptor related protein complex 2 subunit alpha 2

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding PubMed 
enables oligosaccharide binding PubMed 
Component Evidence Code Pubs
located_in endomembrane system PubMed 

General protein information

Preferred Names
chitinase domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085841.1 Reference rAnoCar3.1.pri

    Range
    264415987..264550104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_062975659.1XP_062831729.1  chitinase domain-containing protein 1 isoform X1

  2. XM_003214770.4XP_003214818.1  chitinase domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    G1KR92
    Conserved Domains (2) summary
    cd02876
    Location:81394
    GH18_SI-CLP; Stabilin-1 interacting chitinase-like protein (SI-CLP) is a eukaryotic chitinase-like protein of unknown function that interacts with the endocytic/sorting transmembrane receptor stabilin-1 and is secreted from the lysosome. SI-CLP has a glycosyl ...
    smart00636
    Location:82385
    Glyco_18; Glyco_18 domain
  3. XM_062975708.1XP_062831778.1  chitinase domain-containing protein 1 isoform X1

  4. XM_062975775.1XP_062831845.1  chitinase domain-containing protein 1 isoform X1

  5. XM_062975811.1XP_062831881.1  chitinase domain-containing protein 1 isoform X2

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