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cdc42bpab CDC42 binding protein kinase alpha (DMPK-like) b [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100695634, updated on 8-Mar-2024

Summary

Gene symbol
cdc42bpab
Gene description
CDC42 binding protein kinase alpha (DMPK-like) b
See related
Ensembl:ENSONIG00000001238
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Also known as
cdc42bpa
Orthologs
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Genomic context

See cdc42bpab in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
44
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG15 NC_031980.2 (839677..905506)
103 previous assembly ASM185804v2 (GCF_001858045.1) Unplaced Scaffold NW_017613886.1 (839674..906401)

Linkage Group LG15 - NC_031980.2Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein Ub Neighboring gene lefty1 Neighboring gene frizzled class receptor 3a Neighboring gene F-box protein 16 Neighboring gene family with sequence similarity 49 member A

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in actomyosin PubMed 
located_in cytoplasm PubMed 
located_in cytoskeleton PubMed 

General protein information

Preferred Names
serine/threonine-protein kinase MRCK alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031980.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    839677..905506
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005449867.4XP_005449924.1  serine/threonine-protein kinase MRCK alpha isoform X2

    UniProtKB/TrEMBL
    A0A669ESH9
    Conserved Domains (8) summary
    pfam08826
    Location:884944
    DMPK_coil; DMPK coiled coil domain like
    smart00220
    Location:77343
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    COG1340
    Location:506782
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd01243
    Location:11141249
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00130
    Location:10551105
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam00780
    Location:12751536
    CNH; CNH domain
    pfam15796
    Location:533611
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:4412
    PKc_like; Protein Kinases, catalytic domain
  2. XM_005449868.4XP_005449925.1  serine/threonine-protein kinase MRCK alpha isoform X3

    UniProtKB/TrEMBL
    A0A669DHV6, A0A669ESH9
    Related
    ENSONIP00000058001.1, ENSONIT00000093048.1
    Conserved Domains (8) summary
    pfam08826
    Location:884944
    DMPK_coil; DMPK coiled coil domain like
    smart00220
    Location:77343
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    COG1340
    Location:506782
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd01243
    Location:11011236
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00130
    Location:10421092
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam00780
    Location:12621523
    CNH; CNH domain
    pfam15796
    Location:533611
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:4412
    PKc_like; Protein Kinases, catalytic domain
  3. XM_005449866.4XP_005449923.1  serine/threonine-protein kinase MRCK alpha isoform X1

    UniProtKB/TrEMBL
    A0A669ESH9, A0A669F1K0
    Related
    ENSONIP00000077351.1, ENSONIT00000089025.1
    Conserved Domains (8) summary
    pfam08826
    Location:884944
    DMPK_coil; DMPK coiled coil domain like
    smart00220
    Location:77343
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    COG1340
    Location:506782
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd01243
    Location:11141249
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00130
    Location:10551105
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam00780
    Location:12751536
    CNH; CNH domain
    pfam15796
    Location:533611
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:4412
    PKc_like; Protein Kinases, catalytic domain
  4. XM_005449869.4XP_005449926.1  serine/threonine-protein kinase MRCK alpha isoform X4

    UniProtKB/TrEMBL
    A0A669ESH9, I3IY72
    Related
    ENSONIP00000001562.2, ENSONIT00000001561.2
    Conserved Domains (8) summary
    pfam08826
    Location:884944
    DMPK_coil; DMPK coiled coil domain like
    smart00220
    Location:77343
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    COG1340
    Location:506782
    COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
    cd01243
    Location:11141249
    PH_MRCK; MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain
    pfam00130
    Location:10551105
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
    pfam00780
    Location:12751536
    CNH; CNH domain
    pfam15796
    Location:533611
    KELK; KELK-motif containing domain of MRCK Ser/Thr protein kinase
    cl21453
    Location:4412
    PKc_like; Protein Kinases, catalytic domain

RNA

  1. XR_002058847.2 RNA Sequence

  2. XR_002058846.2 RNA Sequence

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