U.S. flag

An official website of the United States government

aars1 alanyl-tRNA synthetase 1 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100699263, updated on 8-Mar-2024

Summary

Gene symbol
aars1
Gene description
alanyl-tRNA synthetase 1
See related
Ensembl:ENSONIG00000011185
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Also known as
aars
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See aars1 in Genome Data Viewer
Location:
chromosome: LG7
Exon count:
20
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG7 NC_031972.2 (7649709..7668365)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG7 NC_031972.1 (8267347..8285999, complement)

Linkage Group LG7 - NC_031972.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109202971 Neighboring gene exosome component 6 Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2 Neighboring gene uncharacterized LOC102079321

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding PubMed 
enables alanine-tRNA ligase activity PubMed 
enables amino acid binding PubMed 
enables aminoacyl-tRNA editing activity PubMed 
enables nucleic acid binding PubMed 
Component Evidence Code Pubs
located_in cytoplasm PubMed 
located_in mitochondrion PubMed 

General protein information

Preferred Names
alanine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031972.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    7649709..7668365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003439447.5XP_003439495.1  alanine--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A0A669C6C7, I3JYY5
    Related
    ENSONIP00000014080.1, ENSONIT00000014090.2
    Conserved Domains (4) summary
    PLN02900
    Location:7959
    PLN02900; alanyl-tRNA synthetase
    cd00673
    Location:7254
    AlaRS_core; Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of ...
    pfam02272
    Location:886957
    DHHA1; DHHA1 domain
    cl08469
    Location:525730
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
External link. Please review our privacy policy.