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Aars1 alanyl-tRNA synthetase 1 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100717660, updated on 8-Mar-2024

Summary

Gene symbol
Aars1
Gene description
alanyl-tRNA synthetase 1
See related
Ensembl:ENSCPOG00000002373
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Also known as
Aars
Orthologs
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Genomic context

See Aars1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947487.1 (105965245..105989429)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176397.1 (2982686..3006812, complement)

NW_026947487.1Genomic Context describing neighboring genes Neighboring gene ST3 beta-galactoside alpha-2,3-sialyltransferase 2 Neighboring gene ATP-dependent RNA helicase DDX19A Neighboring gene small Cajal body-specific RNA 1 Neighboring gene ATP-dependent RNA helicase DDX19B Neighboring gene heterogeneous nuclear ribonucleoprotein C-like Neighboring gene exosome component 6 Neighboring gene transfer RNA glycine (anticodon GCC)

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding PubMed 
enables alanine-tRNA ligase activity PubMed 
enables aminoacyl-tRNA editing activity PubMed 
enables nucleic acid binding PubMed 
Component Evidence Code Pubs
located_in cytoplasm PubMed 
located_in mitochondrion PubMed 

General protein information

Preferred Names
alanine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947487.1 Reference mCavPor4.1

    Range
    105965245..105989429
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003472118.5XP_003472166.1  alanine--tRNA ligase, cytoplasmic

    See identical proteins and their annotated locations for XP_003472166.1

    UniProtKB/TrEMBL
    H0UYE7
    Conserved Domains (6) summary
    PLN02900
    Location:6961
    PLN02900; alanyl-tRNA synthetase
    cd00673
    Location:7254
    AlaRS_core; Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of ...
    pfam02272
    Location:886955
    DHHA1; DHHA1 domain
    cl02787
    Location:494531
    Translation_Factor_II_like; Domain II of Elongation factor Tu (EF-Tu)-like proteins
    cl08469
    Location:525753
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
    cl10459
    Location:402485
    Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
  2. XM_005004610.3XP_005004667.1  alanine--tRNA ligase, cytoplasmic

    See identical proteins and their annotated locations for XP_005004667.1

    UniProtKB/TrEMBL
    H0UYE7
    Related
    ENSCPOP00000002157.2
    Conserved Domains (6) summary
    PLN02900
    Location:6961
    PLN02900; alanyl-tRNA synthetase
    cd00673
    Location:7254
    AlaRS_core; Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of ...
    pfam02272
    Location:886955
    DHHA1; DHHA1 domain
    cl02787
    Location:494531
    Translation_Factor_II_like; Domain II of Elongation factor Tu (EF-Tu)-like proteins
    cl08469
    Location:525753
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
    cl10459
    Location:402485
    Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
  3. XM_013154881.2XP_013010335.1  alanine--tRNA ligase, cytoplasmic

    See identical proteins and their annotated locations for XP_013010335.1

    UniProtKB/TrEMBL
    H0UYE7
    Conserved Domains (6) summary
    PLN02900
    Location:6961
    PLN02900; alanyl-tRNA synthetase
    cd00673
    Location:7254
    AlaRS_core; Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of ...
    pfam02272
    Location:886955
    DHHA1; DHHA1 domain
    cl02787
    Location:494531
    Translation_Factor_II_like; Domain II of Elongation factor Tu (EF-Tu)-like proteins
    cl08469
    Location:525753
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
    cl10459
    Location:402485
    Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
  4. XM_005004611.4XP_005004668.1  alanine--tRNA ligase, cytoplasmic

    See identical proteins and their annotated locations for XP_005004668.1

    UniProtKB/TrEMBL
    H0UYE7
    Conserved Domains (6) summary
    PLN02900
    Location:6961
    PLN02900; alanyl-tRNA synthetase
    cd00673
    Location:7254
    AlaRS_core; Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of ...
    pfam02272
    Location:886955
    DHHA1; DHHA1 domain
    cl02787
    Location:494531
    Translation_Factor_II_like; Domain II of Elongation factor Tu (EF-Tu)-like proteins
    cl08469
    Location:525753
    tRNA_SAD; Threonyl and Alanyl tRNA synthetase second additional domain
    cl10459
    Location:402485
    Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
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