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Pygo2 pygopus family PHD finger 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100759420, updated on 8-Mar-2024

Summary

Gene symbol
Pygo2
Gene description
pygopus family PHD finger 2
See related
Ensembl:ENSCGRG00015003891
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
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Genomic context

See Pygo2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613854.1 (607029..612046)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (65114547..65119536, complement)

NW_003613854.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinases regulatory subunit 1 Neighboring gene CDC28 protein kinase regulatory subunit 1B Neighboring gene SHC adaptor protein 1 Neighboring gene PBX homeobox interacting protein 1 Neighboring gene phosphomevalonate kinase

Genomic regions, transcripts, and products

General protein information

Preferred Names
pygopus homolog 2
Names
Pygopus-like 2
putative pygopus-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613854.1 Reference CriGri_1.0 Primary Assembly

    Range
    607029..612046
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016975181.3XP_016830670.1  pygopus homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7HBX7
    Conserved Domains (2) summary
    TIGR01628
    Location:123204
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd15636
    Location:291344
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)
  2. XM_035455304.1XP_035311195.1  pygopus homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7HBX7
    Conserved Domains (2) summary
    TIGR01628
    Location:123204
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd15636
    Location:291344
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)
  3. XM_007642256.4XP_007640446.1  pygopus homolog 2 isoform X2

    See identical proteins and their annotated locations for XP_007640446.1

    UniProtKB/TrEMBL
    A0A9J7HBX7
    Conserved Domains (2) summary
    TIGR01628
    Location:123204
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd15636
    Location:291344
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)
  4. XM_003501598.5XP_003501646.1  pygopus homolog 2 isoform X1

    See identical proteins and their annotated locations for XP_003501646.1

    UniProtKB/TrEMBL
    G3HC69
    Conserved Domains (2) summary
    cd15636
    Location:328381
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)
    pfam15449
    Location:195295
    Retinal; Retinal protein
  5. XM_027436041.2XP_027291842.1  pygopus homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7HBX7
    Conserved Domains (2) summary
    TIGR01628
    Location:123204
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd15636
    Location:291344
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    65114547..65119536 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027393253.2XP_027249054.1  pygopus homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7HBX7
    Conserved Domains (2) summary
    TIGR01628
    Location:123204
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd15636
    Location:291344
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)
  2. XM_027393252.2XP_027249053.1  pygopus homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7HBX7
    Conserved Domains (2) summary
    TIGR01628
    Location:123204
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd15636
    Location:291344
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)
  3. XM_027393250.2XP_027249051.1  pygopus homolog 2 isoform X1

    UniProtKB/TrEMBL
    G3HC69
    Related
    ENSCGRP00015045675.1, ENSCGRT00015065879.1
    Conserved Domains (2) summary
    cd15636
    Location:328381
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)
    pfam15449
    Location:195295
    Retinal; Retinal protein
  4. XM_035451866.1XP_035307757.1  pygopus homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7HBX7
    Conserved Domains (2) summary
    TIGR01628
    Location:123204
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd15636
    Location:291344
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)
  5. XM_027393251.2XP_027249052.1  pygopus homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7HBX7
    Conserved Domains (2) summary
    TIGR01628
    Location:123204
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd15636
    Location:291344
    PHD_PYGO2; PHD finger found in pygopus homolog 2 (PYGO2)
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