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CUBN cubilin [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100951124, updated on 8-Mar-2024

Summary

Gene symbol
CUBN
Gene description
cubilin
See related
Ensembl:ENSOGAG00000006645
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
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Genomic context

See CUBN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
67
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852414.1 (15989678..16235056)

NW_003852414.1Genomic Context describing neighboring genes Neighboring gene vimentin Neighboring gene tRNA aspartic acid methyltransferase 1 Neighboring gene U6 spliceosomal RNA Neighboring gene Ras suppressor protein 1 Neighboring gene complement C1q like 3 Neighboring gene phosphotriesterase related

Genomic regions, transcripts, and products

Genomic Sequence:
NW_003852414 Unplaced Scaffold Reference OtoGar3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852414.1 Reference OtoGar3

    Range
    15989678..16235056
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003786786.2XP_003786834.1  cubilin

    UniProtKB/TrEMBL
    H0WUM7
    Related
    ENSOGAP00000005954.2, ENSOGAT00000006658.2
    Conserved Domains (4) summary
    smart00179
    Location:302345
    EGF_CA; Calcium-binding EGF-like domain
    cd00041
    Location:26892800
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00054
    Location:429465
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam12947
    Location:350384
    EGF_3; EGF domain
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