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Serpinh1 serpin family H member 1 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101957708, updated on 8-Mar-2024

Summary

Gene symbol
Serpinh1
Gene description
serpin family H member 1
Locus tag
H1C71_009761
See related
EnsemblRapid:ENSSTOG00015008241
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
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Genomic context

See Serpinh1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024404947.1 (62742342..62751791)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936498.1 (4341944..4351432)

NW_024404947.1Genomic Context describing neighboring genes Neighboring gene glycerophosphodiester phosphodiesterase domain containing 5 Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene uncharacterized LOC110597921 Neighboring gene microtubule associated protein 6 Neighboring gene DPH3 homolog Neighboring gene uncharacterized LOC120889653 Neighboring gene monoacylglycerol O-acyltransferase 2

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum PubMed 
located_in extracellular space PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024404947.1 Reference HiC_Itri_2 Primary Assembly

    Range
    62742342..62751791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005323211.4XP_005323268.1  serpin H1

    See identical proteins and their annotated locations for XP_005323268.1

    UniProtKB/TrEMBL
    I3NHH5
    Related
    ENSSTOP00015010150.1, ENSSTOT00015011155.1
    Conserved Domains (1) summary
    cd02046
    Location:34415
    serpinH1_CBP1; serpin family H member 1, collagen-binding protein 1
  2. XM_005323208.4XP_005323265.1  serpin H1

    See identical proteins and their annotated locations for XP_005323265.1

    UniProtKB/TrEMBL
    I3NHH5
    Conserved Domains (1) summary
    cd02046
    Location:34415
    serpinH1_CBP1; serpin family H member 1, collagen-binding protein 1
  3. XM_005323209.4XP_005323266.1  serpin H1

    See identical proteins and their annotated locations for XP_005323266.1

    UniProtKB/TrEMBL
    I3NHH5
    Conserved Domains (1) summary
    cd02046
    Location:34415
    serpinH1_CBP1; serpin family H member 1, collagen-binding protein 1
  4. XM_005323210.4XP_005323267.1  serpin H1

    See identical proteins and their annotated locations for XP_005323267.1

    UniProtKB/TrEMBL
    I3NHH5
    Conserved Domains (1) summary
    cd02046
    Location:34415
    serpinH1_CBP1; serpin family H member 1, collagen-binding protein 1
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