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Ap2b1 adaptor related protein complex 2 subunit beta 1 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101963497, updated on 8-Mar-2024

Summary

Gene symbol
Ap2b1
Gene description
adaptor related protein complex 2 subunit beta 1
Locus tag
H1C71_022375
See related
EnsemblRapid:ENSSTOG00015016212
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
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Genomic context

See Ap2b1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) Unplaced Scaffold NW_024405602.1 (36949807..37069908, complement)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936490.1 (5156..127666)

NW_024405602.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C17orf50 homolog Neighboring gene growth arrest specific 2 like 2 Neighboring gene RAS like family 10 member B Neighboring gene small nucleolar RNA SNORA8 Neighboring gene Z30 small nucleolar RNA Neighboring gene peroxisomal biogenesis factor 12

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of clathrin adaptor complex PubMed 
part_of membrane coat PubMed 

General protein information

Preferred Names
AP-2 complex subunit beta
Names
adaptor related protein complex 2 beta 1 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NW_024405602.1 Reference HiC_Itri_2 Primary Assembly

    Range
    36949807..37069908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013357042.3XP_013212496.1  AP-2 complex subunit beta isoform X1

    UniProtKB/TrEMBL
    I3LZN9
    Conserved Domains (4) summary
    smart00809
    Location:731831
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:840950
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    sd00044
    Location:5175
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:11534
    Adaptin_N; Adaptin N terminal region
  2. XM_013357041.3XP_013212495.1  AP-2 complex subunit beta isoform X1

    UniProtKB/TrEMBL
    I3LZN9
    Conserved Domains (4) summary
    smart00809
    Location:731831
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:840950
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    sd00044
    Location:5175
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:11534
    Adaptin_N; Adaptin N terminal region
  3. XM_013357039.3XP_013212493.1  AP-2 complex subunit beta isoform X1

    UniProtKB/TrEMBL
    I3LZN9
    Conserved Domains (4) summary
    smart00809
    Location:731831
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:840950
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    sd00044
    Location:5175
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:11534
    Adaptin_N; Adaptin N terminal region
  4. XM_013357043.3XP_013212497.1  AP-2 complex subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A287D4J0
    Related
    ENSSTOP00015019936.1, ENSSTOT00015021811.1
    Conserved Domains (4) summary
    smart00809
    Location:717817
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:826936
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    sd00044
    Location:5175
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:11534
    Adaptin_N; Adaptin N terminal region
  5. XM_021724027.2XP_021579702.1  AP-2 complex subunit beta isoform X1

    UniProtKB/TrEMBL
    I3LZN9
    Conserved Domains (4) summary
    smart00809
    Location:731831
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:840950
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    sd00044
    Location:5175
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:11534
    Adaptin_N; Adaptin N terminal region
  6. XM_040269129.1XP_040125063.1  AP-2 complex subunit beta isoform X1

    UniProtKB/TrEMBL
    I3LZN9
    Conserved Domains (4) summary
    smart00809
    Location:731831
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:840950
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    sd00044
    Location:5175
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:11534
    Adaptin_N; Adaptin N terminal region
  7. XM_013357040.3XP_013212494.1  AP-2 complex subunit beta isoform X1

    UniProtKB/TrEMBL
    I3LZN9
    Related
    ENSSTOP00015019934.1, ENSSTOT00015021809.1
    Conserved Domains (4) summary
    smart00809
    Location:731831
    Alpha_adaptinC2; Adaptin C-terminal domain
    smart01020
    Location:840950
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    sd00044
    Location:5175
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:11534
    Adaptin_N; Adaptin N terminal region
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