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Tgm4 transglutaminase 4 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102010493, updated on 16-Nov-2024

Summary

Gene symbol
Tgm4
Gene description
transglutaminase 4
See related
Ensembl:ENSCLAG00000014844 RGD:8875480
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See Tgm4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955420.1 (26736880..26766386, complement)

NW_004955420.1Genomic Context describing neighboring genes Neighboring gene exosome component 7 Neighboring gene zinc finger DHHC-type palmitoyltransferase 3 Neighboring gene uncharacterized LOC102009284 Neighboring gene tubulin alpha-1A chain-like Neighboring gene kinesin family member 15 Neighboring gene UPF0547 protein C16orf87

Genomic regions, transcripts, and products

Genomic Sequence:
NW_004955420.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in collagen-containing extracellular matrix PubMed 

General protein information

Preferred Names
protein-glutamine gamma-glutamyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955420.1 Reference ChiLan1.0 Primary Assembly

    Range
    26736880..26766386 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005383619.2XP_005383676.2  protein-glutamine gamma-glutamyltransferase 4

    UniProtKB/TrEMBL
    A0A8C2YTA1
    Related
    ENSCLAP00000021690.1, ENSCLAT00000021893.1
    Conserved Domains (4) summary
    smart00460
    Location:404495
    TGc; Transglutaminase/protease-like homologues
    COG1305
    Location:408503
    YebA; Transglutaminase-like enzyme, putative cysteine protease [Posttranslational modification, protein turnover, chaperones]
    pfam00868
    Location:150263
    Transglut_N; Transglutaminase family
    pfam00927
    Location:729826
    Transglut_C; Transglutaminase family, C-terminal ig like domain
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