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nrxn3a neurexin 3a [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103035103, updated on 11-Jan-2025

Summary

Gene symbol
nrxn3a
Gene description
neurexin 3a
See related
EnsemblRapid:ENSAMXG00025013201
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Acestrorhamphidae; Acestrorhamphinae; Astyanax
Also known as
nrxn3
Orthologs
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Genomic context

See nrxn3a in Genome Data Viewer
Location:
chromosome: 14
Exon count:
28
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 14 NC_064421.1 (6909368..7413495)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 9 NC_035905.1 (36588904..37101581, complement)

Chromosome 14 - NC_064421.1Genomic Context describing neighboring genes Neighboring gene aarF domain containing kinase 1 Neighboring gene uncharacterized LOC125781121 Neighboring gene uncharacterized LOC125781133 Neighboring gene uncharacterized LOC111193149 Neighboring gene iodothyronine deiodinase 2

Genomic regions, transcripts, and products

General protein information

Preferred Names
neurexin 3a
Names
neurexin 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064421.1 Reference AstMex3_surface

    Range
    6909368..7413495
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049464234.1XP_049320191.1  neurexin 3a isoform X14

    UniProtKB/TrEMBL
    A0A3B1J9M8
  2. XM_049464236.1XP_049320193.1  neurexin 3a isoform X15

    UniProtKB/TrEMBL
    A0A3B1J9M8
  3. XM_049464231.1XP_049320188.1  neurexin 3a isoform X11

    UniProtKB/TrEMBL
    W5LHA6
  4. XM_049464237.1XP_049320194.1  neurexin 3a isoform X16

    UniProtKB/TrEMBL
    A0A3B1J9M8
  5. XM_049464238.1XP_049320195.1  neurexin 3a isoform X17

    UniProtKB/TrEMBL
    A0A3B1J9M8
  6. XM_049464222.1XP_049320179.1  neurexin 3a isoform X1

    UniProtKB/TrEMBL
    A0A3B1KBW1, A0A8B9HSM7, A0A8B9JC76
  7. XM_049464223.1XP_049320180.1  neurexin 3a isoform X2

    UniProtKB/TrEMBL
    A0A3B1KBW1, A0A8B9HSM7, A0A8B9JC76
  8. XM_049464233.1XP_049320190.1  neurexin 3a isoform X13

    UniProtKB/TrEMBL
    A0A3B1KBW1, A0A8B9HSM7, A0A8B9JC76
    Related
    ENSAMXP00025017960.1, ENSAMXT00025026872.1
  9. XM_049464227.1XP_049320184.1  neurexin 3a isoform X6

    UniProtKB/TrEMBL
    A0A8B9HSM7
  10. XM_049464224.1XP_049320181.1  neurexin 3a isoform X3

    UniProtKB/TrEMBL
    A0A3B1KBW1, A0A8B9JC76
  11. XM_049464225.1XP_049320182.1  neurexin 3a isoform X4

    UniProtKB/TrEMBL
    A0A3B1KBW1, A0A8B9HV65, A0A8B9JC76
  12. XM_049464229.1XP_049320186.1  neurexin 3a isoform X9

    UniProtKB/TrEMBL
    A0A8B9HSM7
    Related
    ENSAMXP00025018184.1, ENSAMXT00025027197.1
  13. XM_049464232.1XP_049320189.1  neurexin 3a isoform X12

    UniProtKB/TrEMBL
    A0A8B9HW10
    Related
    ENSAMXP00025017923.1, ENSAMXT00025026801.1
  14. XM_049464228.1XP_049320185.1  neurexin 3a isoform X7

    UniProtKB/TrEMBL
    A0A8B9HSI3
  15. XM_049464230.1XP_049320187.1  neurexin 3a isoform X10

    UniProtKB/TrEMBL
    A0A8B9HSI3
    Related
    ENSAMXP00025017980.1, ENSAMXT00025026901.1
  16. XM_049464226.1XP_049320183.1  neurexin 3a isoform X5

    UniProtKB/TrEMBL
    A0A3B1KBW1, A0A8B9JC76
  17. XM_022673245.2XP_022528966.1  neurexin 3a isoform X8

    UniProtKB/TrEMBL
    A0A3B1KBW1, A0A8B9JC76
    Related
    ENSAMXP00025017985.1, ENSAMXT00025026910.1
    Conserved Domains (6) summary
    smart00282
    Location:282413
    LamG; Laminin G domain
    cd00054
    Location:647680
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    cd00110
    Location:23177
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00008
    Location:198229
    EGF; EGF-like domain
    pfam01034
    Location:16111663
    Syndecan; Syndecan domain
    pfam02210
    Location:8991027
    Laminin_G_2; Laminin G domain
  18. XM_022673260.2XP_022528981.2  neurexin 3a isoform X20

  19. XM_022673261.2XP_022528982.2  neurexin 3a isoform X21

  20. XM_007248480.3XP_007248542.3  neurexin 3a isoform X19

  21. XM_022673257.2XP_022528978.2  neurexin 3a isoform X18

    UniProtKB/TrEMBL
    A0A3B1K167

RNA

  1. XR_007424264.1 RNA Sequence

  2. XR_007424265.1 RNA Sequence

  3. XR_007424266.1 RNA Sequence

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