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Itgb2 integrin subunit beta 2 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105998230, updated on 13-Mar-2024

Summary

Gene symbol
Itgb2
Gene description
integrin subunit beta 2
See related
Ensembl:ENSDORG00000012531
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
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Genomic context

See Itgb2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267375.1 (235810..253313, complement)

NW_012267375.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 G2 Neighboring gene small ubiquitin like modifier 3 Neighboring gene PTTG1 interacting protein Neighboring gene SLX9 ribosome biogenesis factor Neighboring gene adenosine deaminase RNA specific B1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_012267375.1 Unplaced Scaffold Reference Dord_2.0

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amyloid-beta binding PubMed 
enables integrin binding PubMed 
Component Evidence Code Pubs
located_in cell surface PubMed 
located_in focal adhesion PubMed 
part_of integrin complex PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267375.1 Reference Dord_2.0

    Range
    235810..253313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013032895.1XP_012888349.1  integrin beta-2

    UniProtKB/TrEMBL
    A0A1S3GJE3
    Related
    ENSDORP00000011790.2, ENSDORT00000012538.2
    Conserved Domains (4) summary
    pfam07965
    Location:521598
    Integrin_B_tail; Integrin beta tail domain
    pfam08725
    Location:625665
    Integrin_b_cyt; Integrin beta cytoplasmic domain
    pfam12785
    Location:433529
    VESA1_N; Variant erythrocyte surface antigen-1
    cl00057
    Location:8346
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
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