U.S. flag

An official website of the United States government

GALNT15 polypeptide N-acetylgalactosaminyltransferase 15 [ Calidris pugnax (ruff) ]

Gene ID: 106885525, updated on 3-Aug-2024

Summary

Gene symbol
GALNT15
Gene description
polypeptide N-acetylgalactosaminyltransferase 15
See related
Ensembl:ENSCPUG00000010785
Gene type
protein coding
RefSeq status
MODEL
Organism
Calidris pugnax
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See GALNT15 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090803.1 (8494625..8522263, complement)

NW_015090803.1Genomic Context describing neighboring genes Neighboring gene raftlin, lipid raft linker 1 Neighboring gene oxidoreductase NAD binding domain containing 1 Neighboring gene diphthamide biosynthesis 3 Neighboring gene ankyrin repeat domain 28 Neighboring gene 2-hydroxyacyl-CoA lyase 1 Neighboring gene biotinidase

Genomic regions, transcripts, and products

Genomic Sequence:
NW_015090803.1 Unplaced Scaffold Reference ASM143184v1

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus PubMed 

General protein information

Preferred Names
polypeptide N-acetylgalactosaminyltransferase 15

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM143184v1

Genomic

  1. NW_015090803.1 Reference ASM143184v1

    Range
    8494625..8522263 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014937771.1XP_014793257.1  polypeptide N-acetylgalactosaminyltransferase 15 isoform X1

    Conserved Domains (3) summary
    cd02510
    Location:206505
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:519640
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:517638
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
  2. XM_014937772.1XP_014793258.1  polypeptide N-acetylgalactosaminyltransferase 15 isoform X2

    Related
    ENSCPUP00000015530.1, ENSCPUT00000018412.1
    Conserved Domains (3) summary
    cd02510
    Location:197496
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:510631
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:508629
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

RNA

  1. XR_001411458.1 RNA Sequence

External link. Please review our privacy policy.