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nell2a neural EGFL like 2a [ Cyprinodon variegatus (sheepshead minnow) ]

Gene ID: 107089509, updated on 14-Mar-2024

Summary

Gene symbol
nell2a
Gene description
neural EGFL like 2a
See related
Ensembl:ENSCVAG00000002685
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinodon variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon
Also known as
nell2
Orthologs
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Genomic context

See nell2a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current C_variegatus-1.0 (GCF_000732505.1) Unplaced Scaffold NW_015150708.1 (621621..759494, complement)

NW_015150708.1Genomic Context describing neighboring genes Neighboring gene twinfilin actin binding protein 1 Neighboring gene transmembrane protein 117 Neighboring gene developing brain homeobox 2 Neighboring gene sizzled

Genomic regions, transcripts, and products

Genomic Sequence:
NW_015150708.1 Unplaced Scaffold Reference C_variegatus-1.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding PubMed 
enables protein binding PubMed 

General protein information

Preferred Names
protein kinase C-binding protein NELL2
Names
neural EGFL like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinodon variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_variegatus-1.0 Primary Assembly

Genomic

  1. NW_015150708.1 Reference C_variegatus-1.0 Primary Assembly

    Range
    621621..759494 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015382349.1XP_015237835.1  protein kinase C-binding protein NELL2 isoform X2

    Conserved Domains (6) summary
    smart00179
    Location:522556
    EGF_CA; Calcium-binding EGF-like domain
    smart00210
    Location:27212
    TSPN; Thrombospondin N-terminal -like domains
    pfam07645
    Location:569600
    EGF_CA; Calcium-binding EGF domain
    pfam12947
    Location:485520
    EGF_3; EGF domain
    cl00057
    Location:434476
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl17735
    Location:272328
    VWC; von Willebrand factor type C domain
  2. XM_015382348.1XP_015237834.1  protein kinase C-binding protein NELL2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2CA49
    Related
    ENSCVAP00000001663.1, ENSCVAT00000013036.1
    Conserved Domains (6) summary
    smart00179
    Location:554588
    EGF_CA; Calcium-binding EGF-like domain
    smart00210
    Location:27212
    TSPN; Thrombospondin N-terminal -like domains
    pfam07645
    Location:601632
    EGF_CA; Calcium-binding EGF domain
    pfam12947
    Location:485520
    EGF_3; EGF domain
    cl00057
    Location:434476
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl17735
    Location:272328
    VWC; von Willebrand factor type C domain
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