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LOC109050852 chondroitin sulfate proteoglycan 4-like [ Cyprinus carpio (common carp) ]

Gene ID: 109050852, updated on 20-Sep-2023

Summary

Gene symbol
LOC109050852
Gene description
chondroitin sulfate proteoglycan 4-like
See related
Ensembl:ENSCCRG00000006425
Gene type
protein coding
RefSeq status
MODEL
Organism
Cyprinus carpio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
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Genomic context

See LOC109050852 in Genome Data Viewer
Location:
chromosome: A25
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM1834038v1 (GCF_018340385.1) A25 NC_056596.1 (4049550..4096598, complement)
100 previous assembly common carp genome (GCF_000951615.1) 49 NC_031745.1 (1108029..1130577)

Chromosome A25 - NC_056596.1Genomic Context describing neighboring genes Neighboring gene snurportin-1-like Neighboring gene sorting nexin-33-like Neighboring gene leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 Neighboring gene high mobility group protein 20A-like

Genomic regions, transcripts, and products

General protein information

Preferred Names
chondroitin sulfate proteoglycan 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1834038v1 Primary Assembly

Genomic

  1. NC_056596.1 Reference ASM1834038v1 Primary Assembly

    Range
    4049550..4096598 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042715076.1XP_042571010.1  chondroitin sulfate proteoglycan 4-like

    UniProtKB/TrEMBL
    A0A8C1IMW5, A0A9Q9VTN9
    Conserved Domains (1) summary
    cd00110
    Location:205364
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
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