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Comp cartilage oligomeric matrix protein [ Mus caroli (Ryukyu mouse) ]

Gene ID: 110300418, updated on 15-Mar-2024

Summary

Gene symbol
Comp
Gene description
cartilage oligomeric matrix protein
See related
Ensembl:MGP_CAROLIEiJ_G0031143
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus caroli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Orthologs
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Genomic context

See Comp in Genome Data Viewer
Location:
chromosome: 8
Exon count:
20
Annotation release Status Assembly Chr Location
101 current CAROLI_EIJ_v1.1 (GCF_900094665.1) 8 NC_034577.1 (62585125..62593543)

Chromosome 8 - NC_034577.1Genomic Context describing neighboring genes Neighboring gene COPI coat complex subunit epsilon Neighboring gene ceramide synthase 1 Neighboring gene growth differentiation factor 1 Neighboring gene UPF1 RNA helicase and ATPase Neighboring gene CREB regulated transcription coactivator 1 Neighboring gene kelch like family member 26

Genomic regions, transcripts, and products

Genomic Sequence:
NC_034577.1 Chromosome 8 Reference CAROLI_EIJ_v1.1 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular region PubMed 

General protein information

Preferred Names
cartilage oligomeric matrix protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus caroli Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAROLI_EIJ_v1.1 Primary Assembly

Genomic

  1. NC_034577.1 Reference CAROLI_EIJ_v1.1 Primary Assembly

    Range
    62585125..62593543
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021170585.2XP_021026244.2  cartilage oligomeric matrix protein isoform X1

    UniProtKB/TrEMBL
    A0A6P5QEX3
    Related
    MGP_CAROLIEiJ_P0084767, MGP_CAROLIEiJ_T0084767.1
  2. XM_021170587.1XP_021026246.1  cartilage oligomeric matrix protein isoform X2

    UniProtKB/TrEMBL
    A0A6P5QAJ7
    Conserved Domains (5) summary
    smart00179
    Location:67105
    EGF_CA; Calcium-binding EGF-like domain
    sd00001
    Location:284305
    TSP3; TSP3 repeat_short [structural motif]
    sd00002
    Location:188223
    TSP3; TSP3 repeat_long [structural motif]
    pfam02412
    Location:188223
    TSP_3; Thrombospondin type 3 repeat
    pfam05735
    Location:433630
    TSP_C; Thrombospondin C-terminal region
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