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EGF epidermal growth factor [ Neomonachus schauinslandi (Hawaiian monk seal) ]

Gene ID: 110575510, updated on 15-Mar-2024

Summary

Gene symbol
EGF
Gene description
epidermal growth factor
See related
EnsemblRapid:ENSNSCG00000023546
Gene type
protein coding
RefSeq status
MODEL
Organism
Neomonachus schauinslandi
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
Orthologs
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Genomic context

See EGF in Genome Data Viewer
Location:
chromosome: 2
Exon count:
25
Annotation release Status Assembly Chr Location
101 current ASM220157v2 (GCF_002201575.2) 2 NC_058404.1 (113299885..113400783, complement)
100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734296.1 (8789510..8890411, complement)

Chromosome 2 - NC_058404.1Genomic Context describing neighboring genes Neighboring gene glutamyl aminopeptidase Neighboring gene 60S ribosomal protein L17-like Neighboring gene ELOVL fatty acid elongase 6 Neighboring gene 40S ribosomal protein S27-like Neighboring gene leucine rich repeat, Ig-like and transmembrane domains 3

Genomic regions, transcripts, and products

General protein information

Preferred Names
pro-epidermal growth factor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM220157v2

Genomic

  1. NC_058404.1 Reference ASM220157v2

    Range
    113299885..113400783 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021684487.1XP_021540162.1  pro-epidermal growth factor isoform X2

    UniProtKB/TrEMBL
    A0A2Y9GM28
    Related
    ENSNSCP00000029866.1, ENSNSCT00000033592.1
    Conserved Domains (6) summary
    smart00135
    Location:593634
    LY; Low-density lipoprotein-receptor YWTD domain
    smart00179
    Location:314353
    EGF_CA; Calcium-binding EGF-like domain
    cd00054
    Location:866894
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam07645
    Location:825864
    EGF_CA; Calcium-binding EGF domain
    pfam14670
    Location:703738
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl28647
    Location:926966
    PHA02887; EGF-like protein; Provisional
  2. XM_021684488.1XP_021540163.1  pro-epidermal growth factor isoform X3

    UniProtKB/TrEMBL
    A0A2Y9GLR0
    Related
    ENSNSCP00000029865.1, ENSNSCT00000033591.1
    Conserved Domains (6) summary
    smart00135
    Location:635676
    LY; Low-density lipoprotein-receptor YWTD domain
    pfam07645
    Location:867906
    EGF_CA; Calcium-binding EGF domain
    pfam12662
    Location:336359
    cEGF; Complement Clr-like EGF-like
    pfam14670
    Location:745780
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:351393
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl28647
    Location:927967
    PHA02887; EGF-like protein; Provisional
  3. XM_021684486.1XP_021540161.1  pro-epidermal growth factor isoform X1

    UniProtKB/TrEMBL
    A0A2Y9GLW0
    Related
    ENSNSCP00000029864.1, ENSNSCT00000033590.1
    Conserved Domains (7) summary
    smart00135
    Location:635676
    LY; Low-density lipoprotein-receptor YWTD domain
    pfam07645
    Location:867906
    EGF_CA; Calcium-binding EGF domain
    pfam12662
    Location:336359
    cEGF; Complement Clr-like EGF-like
    pfam12947
    Location:912936
    EGF_3; EGF domain
    pfam14670
    Location:745780
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl00057
    Location:351393
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
    cl28647
    Location:9681008
    PHA02887; EGF-like protein; Provisional
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