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nectin1b nectin cell adhesion molecule 1b [ Seriola dumerili (greater amberjack) ]

Gene ID: 111233637, updated on 12-Sep-2024

Summary

Gene symbol
nectin1b
Gene description
nectin cell adhesion molecule 1b
See related
Ensembl:ENSSDUG00000019586
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Also known as
nectin1
Orthologs
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Genomic context

See nectin1b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174668.1 (361134..434349)

NW_019174668.1Genomic Context describing neighboring genes Neighboring gene F-box protein 40 Neighboring gene tetratricopeptide repeat domain 36 Neighboring gene uncharacterized LOC111233645 Neighboring gene trehalase (brush-border membrane glycoprotein) Neighboring gene DEAD (Asp-Glu-Ala-Asp) box helicase 6

Genomic regions, transcripts, and products

Genomic Sequence:
NW_019174668 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in adherens junction PubMed 

General protein information

Preferred Names
nectin-1
Names
nectin cell adhesion molecule 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174668.1 Reference Sdu_1.0 Primary Assembly

    Range
    361134..434349
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022761498.1XP_022617219.1  nectin-1

    UniProtKB/TrEMBL
    A0A3B4V8B5, A0A3B4V8X7
    Related
    ENSSDUP00000027036.1, ENSSDUT00000027515.1
    Conserved Domains (3) summary
    smart00408
    Location:260320
    IGc2; Immunoglobulin C-2 Type
    cd12087
    Location:354382
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cl11960
    Location:144240
    Ig; Immunoglobulin domain
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