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NECTIN1 nectin cell adhesion molecule 1 [ Monodon monoceros (narwhal) ]

Gene ID: 114887073, updated on 15-Mar-2024

Summary

Gene symbol
NECTIN1
Gene description
nectin cell adhesion molecule 1
See related
Ensembl:ENSMMNG00015020601
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodon monoceros
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Monodon
Orthologs
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Genomic context

See NECTIN1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current NGI_Narwhal_1 (GCF_005190385.1) Unplaced Scaffold NW_021703784.1 (12793326..12882908)

NW_021703784.1Genomic Context describing neighboring genes Neighboring gene out at first homolog Neighboring gene tripartite motif containing 29 Neighboring gene 60S ribosomal protein L26 pseudogene Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene small nucleolar RNA SNORA76

Genomic regions, transcripts, and products

Genomic Sequence:
NW_021703784 Unplaced Scaffold Reference NGI_Narwhal_1

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in adherens junction PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Monodon monoceros Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NGI_Narwhal_1

Genomic

  1. NW_021703784.1 Reference NGI_Narwhal_1

    Range
    12793326..12882908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029208436.1XP_029064269.1  nectin-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6CI23
    Related
    ENSMMNP00015028210.1, ENSMMNT00015031011.1
    Conserved Domains (3) summary
    cd05886
    Location:45143
    Ig1_Nectin-1_like; First immunoglobulin (Ig) domain of nectin-1 (also known as poliovirus receptor related protein 1, or as CD111) and similar proteins
    cd05890
    Location:146243
    Ig2_Nectin-1_like; Second immunoglobulin (Ig) domain of nectin-1 (also known as poliovirus receptor related protein 1, or as CD111) and similar proteins
    cd00096
    Location:265330
    Ig; Immunoglobulin domain
  2. XM_029208435.1XP_029064268.1  nectin-1 isoform X1

    UniProtKB/TrEMBL
    A0A4U1F1H9
    Related
    ENSMMNP00015028217.1, ENSMMNT00015031018.1
    Conserved Domains (3) summary
    cd05886
    Location:45143
    Ig1_Nectin-1_like; First immunoglobulin (Ig) domain of nectin-1 (also known as poliovirus receptor related protein 1, or as CD111) and similar proteins
    cd05890
    Location:146243
    Ig2_Nectin-1_like; Second immunoglobulin (Ig) domain of nectin-1 (also known as poliovirus receptor related protein 1, or as CD111) and similar proteins
    cd00096
    Location:265330
    Ig; Immunoglobulin domain
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