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LOC115198619 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3-like [ Salmo trutta (river trout) ]

Gene ID: 115198619, updated on 21-Dec-2023

Summary

Gene symbol
LOC115198619
Gene description
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3-like
See related
Ensembl:ENSSTUG00000035609
Gene type
protein coding
RefSeq status
MODEL
Organism
Salmo trutta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
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Genomic context

See LOC115198619 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
33
Annotation release Status Assembly Chr Location
100 current fSalTru1.1 (GCF_901001165.1) 8 NC_042964.1 (27212780..27318466)

Chromosome 8 - NC_042964.1Genomic Context describing neighboring genes Neighboring gene polyadenylate-binding protein-interacting protein 2B-like Neighboring gene uncharacterized LOC115198617 Neighboring gene uncharacterized LOC115198618 Neighboring gene glycoprotein hormone alpha-2-like Neighboring gene serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit

Genomic regions, transcripts, and products

Genomic Sequence:
NC_042964.1 Chromosome 8 Reference fSalTru1.1 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

General protein information

Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSalTru1.1 Primary Assembly

Genomic

  1. NC_042964.1 Reference fSalTru1.1 Primary Assembly

    Range
    27212780..27318466
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029760691.1XP_029616551.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3-like isoform X1

    UniProtKB/TrEMBL
    A0A674CDH8, A0A674CEV8
    Related
    ENSSTUP00000081736.1, ENSSTUT00000086983.1
    Conserved Domains (8) summary
    cd00275
    Location:712828
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08591
    Location:322678
    PI-PLCc_beta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta
    cd15898
    Location:160188
    EFh_PI-PLC; EF-hand motif [structural motif]
    cl28895
    Location:160309
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    pfam06631
    Location:933963
    DUF1154; Protein of unknown function (DUF1154)
    pfam08703
    Location:10201190
    PLC-beta_C; PLC-beta C terminal
    pfam09731
    Location:8251114
    Mitofilin; Mitochondrial inner membrane protein
    pfam17787
    Location:17152
    PH_14; PH domain
  2. XM_029760692.1XP_029616552.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3-like isoform X2

    UniProtKB/TrEMBL
    A0A674CDH8
    Related
    ENSSTUP00000081800.1, ENSSTUT00000087049.1
    Conserved Domains (8) summary
    cd00275
    Location:712828
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08591
    Location:322678
    PI-PLCc_beta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta
    cd15898
    Location:160188
    EFh_PI-PLC; EF-hand motif [structural motif]
    cl28895
    Location:160309
    EFh_PI-PLC; EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes
    pfam06631
    Location:933963
    DUF1154; Protein of unknown function (DUF1154)
    pfam08703
    Location:10201157
    PLC-beta_C; PLC-beta C terminal
    pfam09731
    Location:8251114
    Mitofilin; Mitochondrial inner membrane protein
    pfam17787
    Location:17152
    PH_14; PH domain
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