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chsy1 chondroitin sulfate synthase 1 [ Sphaeramia orbicularis (orbiculate cardinalfish) ]

Gene ID: 115410305, updated on 17-Mar-2024

Summary

Gene symbol
chsy1
Gene description
chondroitin sulfate synthase 1
See related
Ensembl:ENSSORG00005003455
Gene type
protein coding
RefSeq status
MODEL
Organism
Sphaeramia orbicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Kurtiformes; Apogonoidei; Apogonidae; Apogoninae; Sphaeramia
Orthologs
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Genomic context

See chsy1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
100 current fSphaOr1.1 (GCF_902148855.1) 3 NC_043959.1 (16251822..16284536)

Chromosome 3 - NC_043959.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat serine/threonine-protein kinase 1-like Neighboring gene selenoprotein S Neighboring gene pleckstrin homology domain containing, family F (with FYVE domain) member 1 Neighboring gene POP4 homolog, ribonuclease P/MRP subunit

Genomic regions, transcripts, and products

Genomic Sequence:
NC_043959.1 Chromosome 3 Reference fSphaOr1.1

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi cisterna membrane PubMed 

General protein information

Preferred Names
chondroitin sulfate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sphaeramia orbicularis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fSphaOr1.1

Genomic

  1. NC_043959.1 Reference fSphaOr1.1

    Range
    16251822..16284536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030121909.1XP_029977769.1  chondroitin sulfate synthase 1

    UniProtKB/TrEMBL
    A0A672YM68
    Related
    ENSSORP00005005695.1, ENSSORT00005005939.1
    Conserved Domains (2) summary
    pfam05679
    Location:235774
    CHGN; Chondroitin N-acetylgalactosaminyltransferase
    cl21608
    Location:84305
    Galactosyl_T; Galactosyltransferase
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