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LGI1 leucine rich glioma inactivated 1 [ Chelonoidis abingdonii (Abingdon island giant tortoise) ]

Gene ID: 116832407, updated on 18-Mar-2024

Summary

Gene symbol
LGI1
Gene description
leucine rich glioma inactivated 1
See related
Ensembl:ENSCABG00000012040
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonoidis abingdonii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Testudinidae; Chelonoidis
Orthologs
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Genomic context

See LGI1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM359739v1 (GCF_003597395.1) Unplaced Scaffold NW_022643267.1 (1048686..1069425, complement)

NW_022643267.1Genomic Context describing neighboring genes Neighboring gene NOC3 like DNA replication regulator Neighboring gene phospholipase C epsilon 1 Neighboring gene solute carrier family 35 member G1 Neighboring gene protein FRA10AC1 Neighboring gene phosphodiesterase 6C

Genomic regions, transcripts, and products

Genomic Sequence:
NW_022643267 Unplaced Scaffold Reference ASM359739v1

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space PubMed 

General protein information

Preferred Names
leucine-rich glioma-inactivated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonoidis abingdonii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM359739v1

Genomic

  1. NW_022643267.1 Reference ASM359739v1

    Range
    1048686..1069425 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_032793112.1XP_032649003.1  leucine-rich glioma-inactivated protein 1

    UniProtKB/TrEMBL
    A0A8C0H102
    Conserved Domains (4) summary
    TIGR00864
    Location:138213
    PCC; polycystin cation channel protein
    sd00031
    Location:85108
    LRR_1; leucine-rich repeat [structural motif]
    pfam03736
    Location:496535
    EPTP; EPTP domain
    pfam13855
    Location:107165
    LRR_8; Leucine rich repeat
  2. XM_032793113.1XP_032649004.1  leucine-rich glioma-inactivated protein 1

    UniProtKB/TrEMBL
    A0A8C0H102
    Related
    ENSCABP00000016172.1, ENSCABT00000017729.1
    Conserved Domains (4) summary
    TIGR00864
    Location:138213
    PCC; polycystin cation channel protein
    sd00031
    Location:85108
    LRR_1; leucine-rich repeat [structural motif]
    pfam03736
    Location:496535
    EPTP; EPTP domain
    pfam13855
    Location:107165
    LRR_8; Leucine rich repeat
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