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LOC120506519 phospholipase A2-like [ Passer montanus (Eurasian tree sparrow) ]

Gene ID: 120506519, updated on 18-Sep-2024

Summary

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Gene symbol
LOC120506519
Gene description
phospholipase A2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Passer montanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Passer
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Genomic context

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See LOC120506519 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ASM1480565v1 (GCF_014805655.1) Unplaced Scaffold NW_024368707.1 (2083383..2096838)

NW_024368707.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 15 Neighboring gene claudin domain containing 1 Neighboring gene uncharacterized LOC120506389 Neighboring gene GRAM domain containing 1C

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024368707 Unplaced Scaffold Reference ASM1480565v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding PubMed 
enables calcium-dependent phospholipase A2 activity PubMed 
enables phospholipid binding PubMed 
Process Evidence Code Pubs
involved_in arachidonate secretion PubMed 
involved_in lipid catabolic process PubMed 
involved_in negative regulation of DNA-binding transcription factor activity PubMed 
involved_in phospholipid metabolic process PubMed 

General protein information

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Preferred Names
phospholipase A2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Passer montanus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1480565v1 Primary Assembly

Genomic

  1. NW_024368707.1 Reference ASM1480565v1 Primary Assembly

    Range
    2083383..2096838
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039718189.1 → XP_039574123.1  phospholipase A2-like

    Conserved Domains (1) summary
    cd00125
    Location:30 → 144
    PLA2c; Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a metal-dependent ...

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