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VTN vitronectin [ Cervus canadensis ]

Gene ID: 122448537, updated on 22-Mar-2024

Summary

Gene symbol
VTN
Gene description
vitronectin
Gene type
protein coding
RefSeq status
MODEL
Organism
Cervus canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
Orthologs
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Genomic context

See VTN in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
100 current ASM1932006v1 (GCF_019320065.1) 1 NC_057386.1 (40448011..40450978)

Chromosome 1 - NC_057386.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 46 member 1 Neighboring gene sterile alpha and TIR motif containing 1 Neighboring gene uncharacterized LOC122448532 Neighboring gene SEBOX homeobox Neighboring gene transmembrane protein 199

Genomic regions, transcripts, and products

Genomic Sequence:
NC_057386.1 Chromosome 1 Reference ASM1932006v1

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix binding PubMed 
enables polysaccharide binding PubMed 
enables scavenger receptor activity PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin PubMed 
involved_in cell-matrix adhesion PubMed 
involved_in immune response PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix PubMed 
located_in extracellular space PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cervus canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1932006v1

Genomic

  1. NC_057386.1 Reference ASM1932006v1

    Range
    40448011..40450978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043479922.1XP_043335857.1  vitronectin

    Conserved Domains (2) summary
    smart00201
    Location:2062
    SO; Somatomedin B -like domains
    cd00094
    Location:152474
    HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
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