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jpt1b Jupiter microtubule associated homolog 1b [ Danio rerio (zebrafish) ]

Gene ID: 402906, updated on 4-Jan-2025

Summary

Official Symbol
jpt1bprovided by ZNC
Official Full Name
Jupiter microtubule associated homolog 1bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-2784
See related
Ensembl:ENSDARG00000099312 AllianceGenome:ZFIN:ZDB-GENE-030131-2784
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
HN1; hn1b; zgc:73237; wu:fc17g11
Summary
Predicted to be located in cytoplasm. Orthologous to human JPT1 (Jupiter microtubule associated homolog 1). [provided by Alliance of Genome Resources, Jan 2025]
Orthologs
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Genomic context

See jpt1b in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (6380150..6417286, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (6494037..6531204, complement)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene zgc:136767 Neighboring gene uncharacterized LOC137490399 Neighboring gene zinc-binding protein A33 Neighboring gene small ubiquitin like modifier 2b Neighboring gene nucleoporin 85

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Interactions

General gene information

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
located_in cytoplasm  

General protein information

Preferred Names
jupiter microtubule associated homolog 1b
Names
hematological and neurological expressed 1
hematological and neurological expressed 1b

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_205613.1NP_991176.1  jupiter microtubule associated homolog 1b

    See identical proteins and their annotated locations for NP_991176.1

    Status: PROVISIONAL

    Source sequence(s)
    AY398359
    UniProtKB/TrEMBL
    Q4QRM1, Q6TGZ7
    Related
    ENSDARP00000130889.1, ENSDART00000160979.2
    Conserved Domains (1) summary
    pfam17054
    Location:1497
    JUPITER; Microtubule-Associated protein Jupiter

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    6380150..6417286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005163709.5XP_005163766.1  jupiter microtubule associated homolog 1b isoform X1

    UniProtKB/TrEMBL
    A0A8M2BAY7
    Conserved Domains (1) summary
    pfam17054
    Location:1497
    JUPITER; Microtubule-Associated protein Jupiter
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