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CD80 CD80 molecule [ Canis lupus familiaris (dog) ]

Gene ID: 403765, updated on 17-Aug-2024

Summary

Official Symbol
CD80provided by VGNC
Official Full Name
CD80 moleculeprovided by VGNC
Primary source
VGNC:VGNC:38975
See related
Ensembl:ENSCAFG00845016834
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See CD80 in Genome Data Viewer
Location:
chromosome: 33
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 33 NC_051837.1 (23415441..23446725, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 33 NC_006615.4 (23207369..23231610, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 33 NC_049254.1 (23822928..23847156, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 33 NC_049293.1 (23217902..23242129, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 33 NC_049774.1 (23253474..23277692, complement)

Chromosome 33 - NC_051837.1Genomic Context describing neighboring genes Neighboring gene protein O-glucosyltransferase 1 Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene ADP-ribosylarginine hydrolase Neighboring gene phospholipase A1 member A Neighboring gene uncharacterized LOC119867335 Neighboring gene popeye domain containing 2

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in external side of plasma membrane PubMed 

General protein information

Preferred Names
T-lymphocyte activation antigen CD80
Names
B7-1 protein
CD80 antigen (CD28 antigen ligand 1, B7-1 antigen)
T-cell co-stimulatory protein B7-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001003147.1NP_001003147.1  T-lymphocyte activation antigen CD80 precursor

    See identical proteins and their annotated locations for NP_001003147.1

    Status: PROVISIONAL

    Source sequence(s)
    AF106824
    UniProtKB/TrEMBL
    A0A8C0K129, A0A8C0TR52, Q9TQX1
    Conserved Domains (3) summary
    cd00096
    Location:3641
    Ig; Ig strand A [structural motif]
    cd16083
    Location:142232
    IgC1_CD80; Immunoglobulin constant (IgC)-like domain of antigen receptor Cluster of Differentiation (CD) 80; member of the C1-set of Ig superfamily (IgSF) domains
    cl11960
    Location:35139
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051837.1 Reference ROS_Cfam_1.0

    Range
    23415441..23446725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038444567.1XP_038300495.1  T-lymphocyte activation antigen CD80 isoform X1

    UniProtKB/TrEMBL
    A0A8C0K129, A0A8C0TR52, Q9TQX1
    Related
    ENSCAFP00845023436.1, ENSCAFT00845029840.1
    Conserved Domains (3) summary
    cd00096
    Location:3641
    Ig; Ig strand A [structural motif]
    cd16083
    Location:142232
    IgC1_CD80; Immunoglobulin constant (IgC)-like domain of antigen receptor Cluster of Differentiation (CD) 80; member of the C1-set of Ig superfamily (IgSF) domains
    cl11960
    Location:35139
    Ig; Immunoglobulin domain
  2. XM_038444568.1XP_038300496.1  T-lymphocyte activation antigen CD80 isoform X1

    UniProtKB/TrEMBL
    A0A8C0K129, A0A8C0TR52, Q9TQX1
    Conserved Domains (3) summary
    cd00096
    Location:3641
    Ig; Ig strand A [structural motif]
    cd16083
    Location:142232
    IgC1_CD80; Immunoglobulin constant (IgC)-like domain of antigen receptor Cluster of Differentiation (CD) 80; member of the C1-set of Ig superfamily (IgSF) domains
    cl11960
    Location:35139
    Ig; Immunoglobulin domain
  3. XM_038444569.1XP_038300497.1  T-lymphocyte activation antigen CD80 isoform X2

    Conserved Domains (3) summary
    cd00096
    Location:3641
    Ig; Ig strand A [structural motif]
    cd16083
    Location:142232
    IgC1_CD80; Immunoglobulin constant (IgC)-like domain of antigen receptor Cluster of Differentiation (CD) 80; member of the C1-set of Ig superfamily (IgSF) domains
    cl11960
    Location:35139
    Ig; Immunoglobulin domain
  4. XM_038444566.1XP_038300494.1  T-lymphocyte activation antigen CD80 isoform X1

    UniProtKB/TrEMBL
    A0A8C0K129, A0A8C0TR52, Q9TQX1
    Conserved Domains (3) summary
    cd00096
    Location:3641
    Ig; Ig strand A [structural motif]
    cd16083
    Location:142232
    IgC1_CD80; Immunoglobulin constant (IgC)-like domain of antigen receptor Cluster of Differentiation (CD) 80; member of the C1-set of Ig superfamily (IgSF) domains
    cl11960
    Location:35139
    Ig; Immunoglobulin domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049293.1 Alternate UMICH_Zoey_3.1

    Range
    23217902..23242129 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049774.1 Alternate UNSW_CanFamBas_1.0

    Range
    23253474..23277692 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049254.1 Alternate UU_Cfam_GSD_1.0

    Range
    23822928..23847156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006615.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    23207369..23231610 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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