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LYL1 LYL1 basic helix-loop-helix family member [ Pan troglodytes (chimpanzee) ]

Gene ID: 468743, updated on 17-Aug-2024

Summary

Official Symbol
LYL1provided by VGNC
Official Full Name
LYL1 basic helix-loop-helix family memberprovided by VGNC
Primary source
VGNC:VGNC:13224
Locus tag
CK820_G0026347
See related
Ensembl:ENSPTRG00000049311
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

See LYL1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (15790592..15796278, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (15792486..15796366, complement)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene GADD45G interacting protein 1 Neighboring gene DAN domain BMP antagonist family member 5 Neighboring gene nuclear factor I X Neighboring gene tRNA methyltransferase 1 Neighboring gene nucleus accumbens associated 1

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

General protein information

Preferred Names
protein lyl-1
Names
lymphoblastic leukemia derived sequence 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    15790592..15796278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016935227.4XP_016790716.1  protein lyl-1 isoform X3

    UniProtKB/TrEMBL
    A0A2I3SC45, A0A2J8LV24, A0A6D2Y1E1
    Related
    ENSPTRP00000074551.1
    Conserved Domains (1) summary
    smart00353
    Location:156208
    HLH; helix loop helix domain
  2. XM_016935226.4XP_016790715.1  protein lyl-1 isoform X2

    Conserved Domains (2) summary
    PHA03247
    Location:69289
    PHA03247; large tegument protein UL36; Provisional
    cd19705
    Location:168232
    bHLH_TS_LYL1; basic helix-loop-helix (bHLH) domain found in protein lyl-1 and similar proteins
  3. XM_054672918.2XP_054528893.1  protein lyl-1 isoform X1

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