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klc2 kinesin light chain 2 [ Danio rerio (zebrafish) ]

Gene ID: 562365, updated on 4-Jan-2025

Summary

Official Symbol
klc2provided by ZNC
Official Full Name
kinesin light chain 2provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-2670
See related
AllianceGenome:ZFIN:ZDB-GENE-030131-2670
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fc15b01; wu:fc15b01; wu:fj62c06; zgc:162288
Summary
Predicted to enable kinesin binding activity. Acts upstream of or within swimming behavior and thyroid hormone generation. Predicted to be located in microtubule. Predicted to be part of kinesin complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in SPOAN syndrome. Orthologous to human KLC2 (kinesin light chain 2). [provided by Alliance of Genome Resources, Jan 2025]
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See klc2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) Unplaced Scaffold NW_018394411.1 (4649..8679, complement)
105 previous assembly GRCz10 (GCF_000002035.5) Unplaced Scaffold NW_003334548.2 (62815..98349, complement)

NW_018394411.1Genomic Context describing neighboring genes Neighboring gene phosphofurin acidic cluster sorting protein 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Clone Names

  • MGC162288

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables kinesin binding  
Component Evidence Code Pubs
is_active_in cytoplasm  
located_in cytoplasm  
located_in cytoskeleton  
part_of kinesin complex  
located_in microtubule  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001083550.1NP_001077019.1  kinesin light chain 2

    Status: PROVISIONAL

    Source sequence(s)
    BC134949
    UniProtKB/TrEMBL
    A4IG65
    Conserved Domains (3) summary
    sd00006
    Location:281309
    TPR; TPR repeat [structural motif]
    pfam13374
    Location:280321
    TPR_10; Tetratricopeptide repeat
    pfam13424
    Location:235313
    TPR_12; Tetratricopeptide repeat

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NW_018394411.1 Reference GRCz11 Primary Assembly

    Range
    4649..8679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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