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rhodopsin

Summary

Gene Symbol

RHO

Organism

Loxodonta africana (African savanna elephant)

External Links

NCBI Gene: 100141369
PubChem: 100141369

Annotation

Keyword

Acetylation
Cell projection
Disulfide bond
G-protein coupled receptor
Glycoprotein
Metal-binding
Palmitate
Phosphoprotein
Reference proteome
Retinal protein
Transmembrane helix
Vision
Zinc

Proteins

Displaying 1 entry
UniProt	Protein Name
Q68J47

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 6 in total

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GO Term	Evidence Code	PMID
rhodopsin mediated signaling pathway
cellular response to light stimulus	IEA	30032202
absorption of visible light
phototransduction	IEA	22301074 30032202
visual perception	IEA	22301074

GO Hierarchy

biological process

cellular process [inference]

signal transduction [inference]

G protein-coupled receptor signaling pathway

rhodopsin mediated signaling pathway

phototransduction

rhodopsin mediated signaling pathway

light absorption [inference]

absorption of visible light

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

multicellular organismal process [inference]

system process [inference]

nervous system process [inference]

sensory perception [inference]

sensory perception of light stimulus [inference]

visual perception

response to stimulus [inference]

response to external stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus [inference]

phototransduction

rhodopsin mediated signaling pathway

response to abiotic stimulus [inference]

response to radiation [inference]

response to light stimulus [inference]

detection of light stimulus [inference]

phototransduction

rhodopsin mediated signaling pathway

cellular response to light stimulus

rhodopsin mediated signaling pathway

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

detection of abiotic stimulus [inference]

detection of light stimulus [inference]

phototransduction

rhodopsin mediated signaling pathway

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

detection of stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus [inference]

phototransduction

rhodopsin mediated signaling pathway

detection of abiotic stimulus [inference]

detection of light stimulus [inference]

phototransduction

rhodopsin mediated signaling pathway

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

rhodopsin mediated signaling pathway

biological regulation [inference]

regulation of biological process [inference]

regulation of cellular process [inference]

signal transduction [inference]

G protein-coupled receptor signaling pathway

rhodopsin mediated signaling pathway

phototransduction

rhodopsin mediated signaling pathway

Displaying entries **1 - 5** of 6 in total

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GO Term	Evidence Code	PMID
photoreceptor outer segment membrane
membrane
plasma membrane	IEA	30032202
photoreceptor inner segment membrane
photoreceptor outer segment	IEA	30032202

GO Hierarchy

cellular component

cellular anatomical entity [inference]

photoreceptor outer segment

membrane

plasma membrane

organelle membrane [inference]

photoreceptor disc membrane

bounding membrane of organelle [inference]

ciliary membrane [inference]

photoreceptor outer segment membrane

plasma membrane region [inference]

cell projection membrane [inference]

ciliary membrane [inference]

photoreceptor outer segment membrane

photoreceptor inner segment membrane

Displaying **all 3** entries
GO Term	Evidence Code	PMID
11-cis retinal binding
metal ion binding
G protein-coupled photoreceptor activity	IEA	30032202

GO Hierarchy

molecular function

binding [inference]

lipid binding [inference]

isoprenoid binding [inference]

retinoid binding [inference]

retinal binding [inference]

11-cis retinal binding

small molecule binding [inference]

vitamin binding [inference]

retinal binding [inference]

11-cis retinal binding

ion binding [inference]

cation binding [inference]

metal ion binding

molecular transducer activity [inference]

signaling receptor activity [inference]

transmembrane signaling receptor activity [inference]

G protein-coupled receptor activity [inference]

G protein-coupled photoreceptor activity

photoreceptor activity [inference]

G protein-coupled photoreceptor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

green-sensitive opsin

Functional Category

G: Carbohydrate transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 5** entries
Gene Ontology
cellular response to light stimulus
metal ion binding
photoreceptor activity
phototransduction
visual perception

Displaying **all 6** entries
InterPro
G protein-coupled receptor, rhodopsin-like
GPCR, rhodopsin-like, 7TM
Opsin
Rhodopsin, N-terminal
Rhodopsin
Visual pigments (opsins) retinal binding site

Ortholog

Displaying entries **1 - 10** of **131** in total

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Species	Gene ID	OrthoDB	Orthologous MAtrix
Homo sapiens	6010	9606_0:0047d4	HUMAN72230
Rattus norvegicus	24717		RATNO29856
Mus musculus	212541		MOUSE50392
Sus scrofa	397437	9823_0:0037a9	PIGXX04624
Pan troglodytes	460685		PANTR32158
Felis catus	493762	9685_0:000817	FELCA05036
Canis lupus familiaris	493763	9615_0:0034aa	CANLF07257
Bos taurus	509933	9913_0:0041f3	BOVIN18052
Macaca mulatta	702931	9544_0:0008ac	MACMU27901
Taeniopygia guttata	751971		TAEGU03490