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rhodopsin

Summary

Gene Symbol

RHO

Organism

Geospiza fortis (medium ground-finch)

External Links

NCBI Gene: 102032899
PubChem: 102032899

Annotation

Keyword

Disulfide bond
G-protein coupled receptor
Glycoprotein
Lipoprotein
Metal-binding
Phosphoprotein
Reference proteome
Retinal protein
Transmembrane helix
Vision
Zinc

Proteins

Displaying 1 entry
UniProt	Protein Name
A0A6I9HNJ0

Annotation information from UniProt.

Gene Ontology (GO)

Displaying **all 5** entries
GO Term	Evidence Code	PMID
cellular response to light stimulus
phototransduction	IEA	22301074
visual perception	IEA	22301074
light absorption
G protein-coupled receptor signaling pathway	IEA	22301074

GO Hierarchy

biological process

cellular process [inference]

signal transduction [inference]

light absorption

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

multicellular organismal process [inference]

system process [inference]

nervous system process [inference]

sensory perception [inference]

sensory perception of light stimulus [inference]

visual perception

response to stimulus [inference]

response to external stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus [inference]

phototransduction

response to abiotic stimulus [inference]

response to radiation [inference]

response to light stimulus [inference]

detection of light stimulus [inference]

phototransduction

cellular response to light stimulus

cellular response to radiation [inference]

cellular response to light stimulus

detection of abiotic stimulus [inference]

detection of light stimulus [inference]

phototransduction

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

detection of stimulus [inference]

detection of external stimulus [inference]

detection of light stimulus [inference]

phototransduction

detection of abiotic stimulus [inference]

detection of light stimulus [inference]

phototransduction

cellular response to stimulus [inference]

cellular response to environmental stimulus [inference]

cellular response to abiotic stimulus [inference]

cellular response to radiation [inference]

cellular response to light stimulus

biological regulation [inference]

regulation of biological process [inference]

regulation of cellular process [inference]

signal transduction [inference]

Displaying **all 2** entries
GO Term	Evidence Code	PMID
membrane	IEA	22301074
photoreceptor outer segment	IEA	30032202

GO Hierarchy

cellular component

cellular anatomical entity [inference]

Displaying **all 3** entries
GO Term	Evidence Code	PMID
metal ion binding
G protein-coupled photoreceptor activity
G protein-coupled receptor activity	IEA	22301074

GO Hierarchy

molecular function

binding [inference]

ion binding [inference]

cation binding [inference]

metal ion binding

molecular transducer activity [inference]

signaling receptor activity [inference]

transmembrane signaling receptor activity [inference]

G protein-coupled receptor activity

G protein-coupled photoreceptor activity

photoreceptor activity [inference]

G protein-coupled photoreceptor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

green-sensitive opsin

Functional Category

G: Carbohydrate transport and metabolism
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 5** entries
Gene Ontology
cellular response to light stimulus
metal ion binding
photoreceptor activity
phototransduction
visual perception

Displaying **all 6** entries
InterPro
G protein-coupled receptor, rhodopsin-like
GPCR, rhodopsin-like, 7TM
Opsin
Rhodopsin, N-terminal
Rhodopsin
Visual pigments (opsins) retinal binding site

Ortholog

Displaying entries **21 - 30** of 84 in total

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Species	Gene ID	OrthoDB
Lepidothrix coronata	108503244	321398_0:00257f
Lepidothrix coronata	108507608	321398_0:003228
Lonchura striata domestica	110473425	299123_0:0032ac
Lonchura striata domestica	110477102	299123_0:002525
Lonchura striata domestica	110477152	299123_0:00336b
Cyanistes caeruleus	111934905	156563_0:002318
Cyanistes caeruleus	111939785	156563_0:002f50
Corapipo altera	113945969	415028_0:000e17
Corapipo altera	113954934	415028_0:002739
Neopelma chrysocephalum	113973280	114329_0:0021ee