GlyCosmos Portal

Submissions

cadherin 17

Summary

Gene Symbol

Cdh17

Organism

Rattus norvegicus (Norway rat)

External Links

NCBI Gene

117048

PubChem

117048

Alliance of Genome Resources

RGD:619748

Annotation

Keyword

Calcium
Cell adhesion
Cell membrane
Glycoprotein
Metal-binding
Reference proteome
Repeat
Signal
Transmembrane helix

Proteins

Displaying **all 2** entries
UniProt	Protein Name
A6II73
P55281	Liver-intestine cadherin

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 21 in total

1

2

3

4

5

Next ›

Last »
GO Term	Evidence Code	PMID
cell morphogenesis	IBA
germinal center B cell differentiation	ISO
marginal zone B cell differentiation	ISO
T cell mediated immunity	ISO
oligopeptide transport	ISS

GO Hierarchy

biological process

immune system process [inference]

immune effector process [inference]

cell activation involved in immune response [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

leukocyte mediated immunity [inference]

lymphocyte mediated immunity [inference]

T cell mediated immunity

immune response [inference]

adaptive immune response [inference]

adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains [inference]

T cell mediated immunity

leukocyte activation [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte activation [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte differentiation [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

B cell activation [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

cellular process [inference]

cell activation [inference]

cell activation involved in immune response [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

leukocyte activation [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte activation [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte differentiation [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

B cell activation [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

cell adhesion [inference]

cell-cell adhesion [inference]

cell-cell adhesion mediated by cadherin

cell-cell adhesion via plasma-membrane adhesion molecules [inference]

signal transduction [inference]

cell surface receptor signaling pathway [inference]

cellular developmental process [inference]

cell differentiation [inference]

leukocyte differentiation [inference]

mononuclear cell differentiation [inference]

lymphocyte differentiation [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

cell motility [inference]

cell migration

transmembrane transport [inference]

oligopeptide transmembrane transport

cellular component organization or biogenesis [inference]

cellular component organization [inference]

cellular component assembly [inference]

cell junction assembly [inference]

cell-cell junction assembly

cell junction organization [inference]

cell junction assembly [inference]

cell-cell junction assembly

cell-cell junction organization [inference]

multicellular organismal process [inference]

cell activation [inference]

cell activation involved in immune response [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

leukocyte activation [inference]

leukocyte activation involved in immune response [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte activation [inference]

lymphocyte activation involved in immune response [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

lymphocyte differentiation [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

B cell activation [inference]

B cell activation involved in immune response [inference]

mature B cell differentiation involved in immune response [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

developmental process [inference]

anatomical structure morphogenesis [inference]

cell morphogenesis

anatomical structure development [inference]

animal organ development [inference]

hematopoietic or lymphoid organ development [inference]

spleen development

cellular developmental process [inference]

cell differentiation [inference]

leukocyte differentiation [inference]

mononuclear cell differentiation [inference]

lymphocyte differentiation [inference]

B cell differentiation

mature B cell differentiation [inference]

mature B cell differentiation involved in immune response [inference]

response to stimulus [inference]

immune response [inference]

adaptive immune response [inference]

adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains [inference]

T cell mediated immunity

localization [inference]

establishment of localization [inference]

transport [inference]

transmembrane transport [inference]

oligopeptide transmembrane transport

organic substance transport [inference]

peptide transport [inference]

oligopeptide transport

oligopeptide transmembrane transport

nitrogen compound transport [inference]

amide transport [inference]

peptide transport [inference]

oligopeptide transport

oligopeptide transmembrane transport

biological regulation [inference]

regulation of biological process [inference]

positive regulation of biological process [inference]

positive regulation of cellular process [inference]

positive regulation of cellular component biogenesis [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

positive regulation of cellular component organization [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

regulation of cellular process [inference]

signal transduction [inference]

cell surface receptor signaling pathway [inference]

regulation of cellular component biogenesis [inference]

regulation of protein-containing complex assembly [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

regulation of integrin activation [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

positive regulation of cellular component biogenesis [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

positive regulation of cellular process [inference]

positive regulation of cellular component biogenesis [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

positive regulation of cellular component organization [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

regulation of cellular component organization [inference]

regulation of protein-containing complex assembly [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

regulation of integrin activation [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

positive regulation of cellular component organization [inference]

positive regulation of protein-containing complex assembly [inference]

positive regulation of integrin activation [inference]

positive regulation of integrin activation by cell surface receptor linked signal transduction

Displaying entries **1 - 5** of 10 in total

1

2

Next ›

Last »
GO Term	Evidence Code	PMID
nucleoplasm	ISO
nucleoplasm	IEA
plasma membrane	ISO
plasma membrane	IEA
adherens junction	IBA

GO Hierarchy

cellular component

protein-containing complex [inference]

membrane protein complex [inference]

plasma membrane protein complex [inference]

catenin complex

cellular anatomical entity [inference]

membrane [inference]

plasma membrane

plasma membrane region [inference]

basolateral plasma membrane

cell junction

anchoring junction [inference]

cell-cell junction [inference]

adherens junction

Displaying entries **1 - 5** of 6 in total

1

2

Next ›

Last »
GO Term	Evidence Code	PMID
integrin binding	ISO
proton-dependent oligopeptide secondary active transmembrane transporter activity	ISS
proton-dependent oligopeptide secondary active transmembrane transporter activity	ISO
calcium ion binding	IEA
beta-catenin binding	IBA

GO Hierarchy

molecular function

transporter activity [inference]

transmembrane transporter activity [inference]

active transmembrane transporter activity [inference]

secondary active transmembrane transporter activity [inference]

secondary active oligopeptide transmembrane transporter activity [inference]

proton-dependent oligopeptide secondary active transmembrane transporter activity

amide transmembrane transporter activity [inference]

peptide transmembrane transporter activity [inference]

oligopeptide transmembrane transporter activity [inference]

secondary active oligopeptide transmembrane transporter activity [inference]

proton-dependent oligopeptide secondary active transmembrane transporter activity

binding [inference]

protein binding [inference]

signaling receptor binding [inference]

integrin binding

beta-catenin binding

cell adhesion molecule binding [inference]

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

calcium ion binding

protein-containing complex binding [inference]

integrin binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

Cadherin

Functional Category

E: Amino acid transport and metabolism
G: Carbohydrate transport and metabolism
O: Posttranslational modification, protein turnover, chaperones

Displaying **all 7** entries
Gene Ontology
adherens junction organization
cadherin binding
calcium ion binding
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
cell-cell adhesion mediated by cadherin
cell-cell junction assembly
homophilic cell adhesion via plasma membrane adhesion molecules

Displaying **all 4** entries
InterPro
Cadherin conserved site
Cadherin-like superfamily
Cadherin-like
Cadherin

Alliance of Genome Resources

Expression

Displaying 1 entry
Location	References
basolateral plasma membrane	PMID:8207063

Ortholog

Displaying entries **1 - 10** of 85 in total

1

2

3

4

5

…

Next ›

Last »
Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Homo sapiens	1015	Xenbase:XB-GENE-868449	HUMAN94738
Mus musculus	12557	Xenbase:XB-GENE-868449	MOUSE42643
Xenopus tropicalis	117048	Xenbase:XB-GENE-868449
Danio rerio	378452		DANRE10964
Pan troglodytes	464286		PANTR42956
Canis lupus familiaris	487050		CANLF11798
Bos taurus	507526		BOVIN06185
Macaca mulatta	698886		MACMU43435
Monodelphis domestica	100029770		MONDO17470
Equus caballus	100051232		HORSE42360

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

Search Tools

Guidelines

Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements