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collagen, type XI, alpha 2

Summary

Gene Symbol

Col11a2

Organism

Mus musculus (house mouse)

External Links

NCBI Gene

12815

PubChem

12815

Alliance of Genome Resources

MGI:88447

Annotation

Keyword

Alternative splicing
Calcium
Collagen
Disulfide bond
Extracellular matrix
Glycoprotein
Hydroxylation
Metal-binding
Reference proteome
Repeat
Signal

Proteins

Displaying **all 2** entries
UniProt	Protein Name
I7HJS8
Q64739

Annotation information from UniProt.

Gene Ontology (GO)

Displaying entries **1 - 5** of 15 in total

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GO Term	Evidence Code	PMID
skeletal system development	ISO
osteoblast differentiation	IEA
tissue homeostasis	IMP	11237662
chondrocyte differentiation	IMP	11668593
sensory perception of sound	ISO

GO Hierarchy

biological process

cellular process [inference]

cellular developmental process [inference]

cell differentiation [inference]

cellular component organization or biogenesis [inference]

cellular component organization [inference]

extracellular structure organization [inference]

extracellular matrix organization [inference]

collagen fibril organization

external encapsulating structure organization [inference]

extracellular matrix organization [inference]

collagen fibril organization

supramolecular fiber organization [inference]

collagen fibril organization

multicellular organismal process [inference]

system process [inference]

nervous system process [inference]

sensory perception [inference]

sensory perception of mechanical stimulus [inference]

sensory perception of sound

multicellular organismal-level homeostasis [inference]

anatomical structure homeostasis [inference]

tissue homeostasis

developmental process [inference]

anatomical structure morphogenesis [inference]

animal organ morphogenesis [inference]

skeletal system morphogenesis

anatomical structure development [inference]

animal organ development [inference]

cartilage development

system development [inference]

skeletal system development

cellular developmental process [inference]

cell differentiation [inference]

homeostatic process [inference]

multicellular organismal-level homeostasis [inference]

anatomical structure homeostasis [inference]

tissue homeostasis

Displaying entries **6 - 8** of 8 in total

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GO Term	Evidence Code	PMID
collagen-containing extracellular matrix	NAS	17876790
collagen-containing extracellular matrix	IBA
collagen-containing extracellular matrix	HDA	28071719

GO Hierarchy

cellular component

protein-containing complex [inference]

collagen trimer

fibrillar collagen trimer [inference]

collagen type XI trimer

cellular anatomical entity [inference]

external encapsulating structure [inference]

extracellular matrix [inference]

collagen-containing extracellular matrix

Displaying **all 4** entries
GO Term	Evidence Code	PMID
extracellular matrix structural constituent	IC	17683922
extracellular matrix structural constituent conferring tensile strength	RCA	28071719
extracellular matrix structural constituent conferring tensile strength	IBA
metal ion binding	IEA

GO Hierarchy

molecular function

structural molecule activity [inference]

extracellular matrix structural constituent

extracellular matrix structural constituent conferring tensile strength

binding [inference]

ion binding [inference]

cation binding [inference]

metal ion binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Eukaryota

Group Name

collagen alpha

Functional Category

E: Amino acid transport and metabolism
G: Carbohydrate transport and metabolism
T: Signal transduction mechanisms

Displaying **all 3** entries
Gene Ontology
extracellular matrix organization
extracellular matrix structural constituent conferring tensile strength
extracellular matrix structural constituent

Displaying **all 2** entries
InterPro
Collagen triple helix repeat
Fibrillar collagen, C-terminal

Disease

Disease Ontology

Displaying **all 3** entries
DO ID	Disease Name	Source
DOID:0080026	otospondylomegaepiphyseal dysplasia, autosomal recessive	Alliance of Genome Resources
DOID:0080046	Stickler syndrome	Alliance of Genome Resources
DOID:0110545	autosomal dominant nonsyndromic deafness 13	Alliance of Genome Resources

Ortholog

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Species	Gene ID	Orthologous MAtrix
Propithecus coquereli	105821662	PROCO30370
Dipodomys ordii	105999826	DIPOR23073
Salmo salar	106569953	SALSA35428
Salmo salar	106588396	SALSA96998
Ictalurus punctatus	108272765	ICTPU03683
Rhinopithecus bieti	108540289	RHIBE39898
Bos indicus x Bos taurus	113881985	BOBOX10792
Rhinolophus ferrumequinum	117020287	RHIFE11378
Balaenoptera musculus	118904436	BALMU25881
Panthera leo	122219758	PANLE15868

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

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Other Information

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Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements