Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / OrganismsTools
SugarDrawer
GlycanBuilder
Glycan Converters
GlycoMaple
GlycomeAtlas
LM-GlycomeAtlas
GALAXY
MCAW
GlycoSim
GRable
Guidelines
MIRAGE
collagen, type XIII, alpha 1
Summary
- Gene Symbol
-
- Col13a1
- Organism
- Mus musculus (house mouse)
Annotation
- Keyword
-
- Alternative splicing
- Cell adhesion
- Cell membrane
- Collagen
- Developmental protein
- Differentiation
- Disulfide bond
- Glycoprotein
- Heparin-binding
- Osteogenesis
- Postsynaptic cell membrane
- Reference proteome
- Signal-anchor
- Transmembrane helix
- Proteins
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| skeletal system development | ||
| morphogenesis of a branching structure | ||
| morphogenesis of a branching structure | ||
| endochondral ossification | ||
| cell-matrix adhesion |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| collagen trimer | ||
| collagen type IX trimer | ||
| basement membrane | ||
| extracellular space | ||
| cell-cell junction |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| heparin binding | ||
| heparin binding | ||
| heparin binding | ||
| extracellular matrix structural constituent conferring tensile strength | ||
| extracellular matrix structural constituent conferring tensile strength |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- collagen
- Functional Category
-
- G: Carbohydrate transport and metabolism
- O: Posttranslational modification, protein turnover, chaperones
- T: Signal transduction mechanisms
| InterPro |
|---|
| Collagen triple helix repeat |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0110673 | congenital myasthenic syndrome 19 |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 1305 | HUMAN01444 | ||
| 12817 | Xenbase:XB-GENE-6462746 | ||
| 185112 | Xenbase:XB-GENE-6462746 | ||
| 499431 | RATNO22189 | ||
| 609516 | CANLF14633 | ||
| 613849 | BOVIN22462 | ||
| 716986 | MACMU46056 | ||
| 100077201 | ORNAN18264 | ||
| 100380336 | SALSA54992 | ||
| 100458326 | PONAB01652 |
