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Glycomics MS raw data Repository
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Glycomics MS Repository for glycan annotations from GlycoWorkbench
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Repository for lectin-assisted multimodality data
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MIRAGE
collagen, type IV, alpha 1
Summary
- Gene Symbol
-
- Col4a1
- Organism
- Mus musculus (house mouse)
Annotation
- Keyword
-
- Angiogenesis
- Basement membrane
- Collagen
- Disulfide bond
- Glycoprotein
- Hydroxylation
- Reference proteome
- Repeat
- Signal
- Proteins
| UniProt | Protein Name |
|---|---|
| P02463 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| branching involved in blood vessel morphogenesis | ||
| branching involved in blood vessel morphogenesis | ||
| brain development | ||
| brain development | ||
| neuromuscular junction development |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| extracellular region | ||
| collagen type IV trimer | ||
| collagen type IV trimer | ||
| basement membrane | ||
| extracellular space |
GO Hierarchy
GO Hierarchy
OrthoDB (Group)
- Group level
- Rodentia
- Group Name
- collagen alpha-1(IV) chain
- Functional Category
-
- E: Amino acid transport and metabolism
- G: Carbohydrate transport and metabolism
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| extracellular matrix organization |
| extracellular matrix structural constituent conferring tensile strength |
| extracellular matrix structural constituent |
| InterPro |
|---|
| C-type lectin fold |
| Collagen IV, non-collagenous domain superfamily |
| Collagen IV, non-collagenous |
| Collagen triple helix repeat |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0050560 | Walker-Warburg syndrome | |
| DOID:0060263 | porencephaly | |
| DOID:0090125 | brain small vessel disease 1 | |
| DOID:557 | kidney disease |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 1282 | Xenbase:XB-GENE-6451485 | HUMAN17621 | |
| 1285 | FB:FBgn0000299 | ||
| 1286 | FB:FBgn0000299 | ||
| 1287 | FB:FBgn0000299 | ||
| 1288 | FB:FBgn0000299 | ||
| 12826 | Xenbase:XB-GENE-6451485 | ||
| 12827 | FB:FBgn0000299 | ||
| 12828 | FB:FBgn0000299 | ||
| 12829 | FB:FBgn0000299 | ||
| 33726 | Xenbase:XB-GENE-6451485 |
