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Repository for lectin-assisted multimodality data
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MIRAGE
collagen type IV alpha 5 chain
Summary
- Gene Symbol
-
- COL4A5
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Alport syndrome
- Alternative splicing
- Basement membrane
- Chromosomal rearrangement
- Collagen
- Deafness
- Disease variant
- Disulfide bond
- Glycoprotein
- Hydroxylation
- Proteomics identification
- Reference proteome
- Repeat
- Signal
- Proteins
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| neuromuscular junction development | ||
| extracellular matrix organization | ||
| collagen-activated tyrosine kinase receptor signaling pathway |
| GO Term | Evidence Code | PMID |
|---|---|---|
| extracellular region | ||
| collagen type IV trimer | ||
| basement membrane |
|
|
| extracellular space | ||
| endoplasmic reticulum lumen |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- collagen
- Functional Category
-
- E: Amino acid transport and metabolism
- Q: Secondary metabolites biosynthesis, transport and catabolism
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| extracellular matrix structural constituent conferring tensile strength |
| extracellular matrix structural constituent |
| InterPro |
|---|
| C-type lectin fold |
| Collagen IV, non-collagenous domain superfamily |
| Collagen IV, non-collagenous |
| Collagen triple helix repeat |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0110034 | X-linked Alport syndrome | |
| DOID:10983 | Alport syndrome |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 1282 | FB:FBgn0000299 | ||
| 1285 | FB:FBgn0000299 | ||
| 1286 | FB:FBgn0000299 | ||
| 1287 | Xenbase:XB-GENE-6041869 | ||
| 1288 | FB:FBgn0000299 | ||
| 12826 | FB:FBgn0000299 | ||
| 12827 | FB:FBgn0000299 | ||
| 12828 | FB:FBgn0000299 | ||
| 12829 | FB:FBgn0000299 | ||
| 12830 | MOUSE65952 |
