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collagen type IX alpha 1 chain
Summary
- Gene Symbol
-
- COL9A1
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Alternative splicing
- Collagen
- Deafness
- Direct protein sequencing
- Disease variant
- Disulfide bond
- Extracellular matrix
- Glycoprotein
- Hydroxylation
- Metal-binding
- Reference proteome
- Repeat
- Signal
- Stickler syndrome
- Zinc
- Proteins
| UniProt | Protein Name |
|---|---|
| P20849 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| animal organ morphogenesis | ||
| extracellular matrix organization |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| extracellular region | ||
| collagen type IX trimer | ||
| collagen type IX trimer | ||
| collagen type IX trimer | ||
| collagen type IX trimer |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| extracellular matrix structural constituent conferring tensile strength | ||
| extracellular matrix structural constituent conferring tensile strength | ||
| extracellular matrix structural constituent conferring tensile strength | ||
| carbohydrate binding |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- collagen
- Functional Category
-
- E: Amino acid transport and metabolism
- G: Carbohydrate transport and metabolism
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| extracellular matrix organization |
| extracellular matrix structural constituent conferring tensile strength |
| InterPro |
|---|
| Collagen triple helix repeat |
| Concanavalin A-like lectin/glucanase domain superfamily |
| Thrombospondin-like, N-terminal domain |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0070301 | multiple epiphyseal dysplasia 6 | |
| DOID:0080046 | Stickler syndrome | |
| DOID:2256 | osteochondrodysplasia |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 1284 | WB:WBGene00001066 | ||
| 1297 | Xenbase:XB-GENE-6255670 | ||
| 12839 | MOUSE28472 | ||
| 85301 | WB:WBGene00001066 | ||
| 305104 | RATNO42786 | ||
| 373864 | WB:WBGene00000251 | ||
| 406548 | DANRE05986 | ||
| 462810 | PANTR38492 | ||
| 553759 | WB:WBGene00000603 | ||
| 714809 | MACMU34825 |
