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Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
collagen type IX alpha 1 chain
Summary
- Gene Symbol
-
- COL9A1
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- 3D-structure
- Alternative splicing
- Collagen
- Deafness
- Direct protein sequencing
- Disease variant
- Disulfide bond
- Extracellular matrix
- Glycoprotein
- Hydroxylation
- Metal-binding
- Reference proteome
- Repeat
- Signal
- Stickler syndrome
- Zinc
- Proteins
| UniProt | Protein Name |
|---|---|
| P20849 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| extracellular matrix organization | ||
| animal organ morphogenesis |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| collagen-containing extracellular matrix | ||
| endoplasmic reticulum lumen | ||
| extracellular region | ||
| extracellular space | ||
| collagen type IX trimer |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| metal ion binding | ||
| extracellular matrix structural constituent conferring tensile strength | ||
| protein homodimerization activity | ||
| carbohydrate binding |
GO Hierarchy
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- collagen
- Functional Category
-
- E: Amino acid transport and metabolism
- O: Posttranslational modification, protein turnover, chaperones
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| extracellular matrix organization |
| extracellular matrix structural constituent conferring tensile strength |
| InterPro |
|---|
| Collagen triple helix repeat |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0070301 | multiple epiphyseal dysplasia 6 | |
| DOID:0080046 | Stickler syndrome | |
| DOID:2256 | osteochondrodysplasia | |
| DOID:8398 | osteoarthritis |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 12839 | MGI:88465 | MOUSE28472 | ||
| 174653 | WB:WBGene00000251 | |||
| 177559 | WB:WBGene00000603 | |||
| 178414 | WB:WBGene00001066 | |||
| 305104 | RGD:1309425 | RATNO42786 | ||
| 406548 | ZFIN:ZDB-GENE-040426-2410 | DANRE05986 | ||
| 446631 | Xenbase:XB-GENE-6255670 | |||
| 462810 | 9598_0:001e21 | PANTR38492 | ||
| 714809 | MACMU34825 | |||
| 100020680 | MONDO13555 |
