GlyCosmos Portal

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desmin

Summary

Gene Symbol

Organism

Mus musculus (house mouse)

External Links

NCBI Gene

13346

PubChem

13346

Alliance of Genome Resources

MGI:94885

Annotation

Keyword

ADP-ribosylation
Cell membrane
Coiled coil
Cytoplasm
Intermediate filament
Methylation
Muscle protein
Nucleus
Phosphoprotein
Reference proteome
Ubl conjugation

Proteins

Displaying **all 2** entries
UniProt	Protein Name
P31001
Q3V1K9

Annotation information from UniProt.

Gene Ontology (GO)

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GO Term	Evidence Code	PMID
nuclear envelope organization	IMP	35959657
muscle organ development	TAS	7720554
intermediate filament organization	ISS
intermediate filament organization	ISO
intermediate filament organization	IBA

GO Hierarchy

biological process

cellular process [inference]

intermediate filament-based process [inference]

intermediate filament cytoskeleton organization [inference]

intermediate filament organization

cellular component organization or biogenesis [inference]

cellular component organization [inference]

organelle organization [inference]

cytoskeleton organization [inference]

intermediate filament cytoskeleton organization [inference]

intermediate filament organization

membrane organization [inference]

nuclear envelope organization

supramolecular fiber organization [inference]

intermediate filament organization

developmental process [inference]

anatomical structure development [inference]

animal organ development [inference]

muscle organ development

skeletal muscle organ development

muscle structure development [inference]

muscle organ development

skeletal muscle organ development

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GO Term	Evidence Code	PMID
nucleus	IDA	26787680
nuclear envelope	IDA	35959657
cytoplasm	IDA	21177767 26787680
cytoplasm	IBA
cytoskeleton	IDA	11694502

GO Hierarchy

cellular component

cellular anatomical entity [inference]

cytoplasm

membrane [inference]

plasma membrane [inference]

sarcolemma

Z disc

cell junction [inference]

synapse [inference]

neuromuscular junction

anchoring junction [inference]

cell-cell junction

cell-cell contact zone [inference]

intercalated disc

envelope [inference]

organelle envelope [inference]

nuclear envelope

organelle [inference]

membrane-bounded organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

non-membrane-bounded organelle [inference]

intracellular non-membrane-bounded organelle [inference]

cytoskeleton

intermediate filament cytoskeleton

contractile fiber

myofibril [inference]

cardiac myofibril

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

nucleus

intracellular non-membrane-bounded organelle [inference]

cytoskeleton

intermediate filament cytoskeleton

contractile fiber

myofibril [inference]

cardiac myofibril

cell pole [inference]

cell tip

supramolecular complex [inference]

supramolecular polymer [inference]

supramolecular fiber [inference]

contractile fiber

myofibril [inference]

cardiac myofibril

polymeric cytoskeletal fiber [inference]

intermediate filament

type III intermediate filament

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GO Term	Evidence Code	PMID
structural constituent of cytoskeleton	TAS	2370005
structural constituent of cytoskeleton	IBA
protein binding	IPI	11694502 21135508 24940650 26343497 26816005 37126682
cytoskeletal protein binding	ISO
cytoskeletal protein binding	IEA

GO Hierarchy

molecular function

structural molecule activity [inference]

structural constituent of cytoskeleton

binding [inference]

protein binding

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Rodentia

Group Name

desmin

Functional Category

K: Transcription
O: Posttranslational modification, protein turnover, chaperones
T: Signal transduction mechanisms

Displaying **all 3** entries
Gene Ontology
intermediate filament organization
skeletal muscle organ development
structural constituent of cytoskeleton

Displaying **all 3** entries
InterPro
Intermediate filament head, DNA-binding domain
Intermediate filament protein, conserved site
Intermediate filament, rod domain

Disease

Disease Ontology

Displaying **all 3** entries
DO ID	Disease Name	Source
DOID:0050700	cardiomyopathy	Alliance of Genome Resources
DOID:0080092	myofibrillar myopathy 1	Alliance of Genome Resources
DOID:0110431	dilated cardiomyopathy 1I	Alliance of Genome Resources

Ortholog

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Species	Gene ID	Alliance of Genome Resources	Orthologous MAtrix
Homo sapiens	1674	Xenbase:XB-GENE-494931	HUMAN67130
Caenorhabditis elegans	2670	WB:WBGene00002058
Caenorhabditis elegans	3848	WB:WBGene00002055
Caenorhabditis elegans	3849	WB:WBGene00002055
Caenorhabditis elegans	3852	WB:WBGene00002055
Caenorhabditis elegans	3855	WB:WBGene00002058
Caenorhabditis elegans	3856	WB:WBGene00002058
Caenorhabditis elegans	3858	WB:WBGene00002055
Caenorhabditis elegans	3872	WB:WBGene00002058
Caenorhabditis elegans	5630	WB:WBGene00002058

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

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Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements