GlyCosmos Portal

Displaying entries **1 - 5** of 45 in total

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GO Term	Evidence Code	PMID
recycling endosome	IEA
external side of plasma membrane	IDA	19487454 20103531 9553049
Schaffer collateral - CA1 synapse	IDA IMP	17065460
cytoplasmic vesicle	IDA	12189152
membrane	IDA	23395392

GO Hierarchy

cellular component

protein-containing complex [inference]

receptor complex

plasma membrane signaling receptor complex [inference]

integrin complex

protein complex involved in cell adhesion [inference]

integrin complex

membrane protein complex [inference]

plasma membrane protein complex [inference]

plasma membrane signaling receptor complex [inference]

integrin complex

cellular anatomical entity [inference]

membrane

plasma membrane

sarcolemma

plasma membrane region [inference]

cell projection membrane [inference]

ruffle membrane

synaptic membrane

postsynaptic membrane

membrane microdomain [inference]

membrane raft

cell junction [inference]

synapse

neuromuscular junction

excitatory synapse [inference]

asymmetric, glutamatergic, excitatory synapse [inference]

cerebellar climbing fiber to Purkinje cell synapse

glutamatergic synapse

asymmetric, glutamatergic, excitatory synapse [inference]

cerebellar climbing fiber to Purkinje cell synapse

neuron to neuron synapse [inference]

asymmetric synapse [inference]

asymmetric, glutamatergic, excitatory synapse [inference]

cerebellar climbing fiber to Purkinje cell synapse

anchoring junction [inference]

cell-cell junction

adherens junction

cell-cell contact zone [inference]

intercalated disc

cell-substrate junction [inference]

external encapsulating structure [inference]

extracellular matrix [inference]

collagen-containing extracellular matrix [inference]

basement membrane

leading edge membrane [inference]

ruffle membrane

myelin sheath abaxonal region

cell projection [inference]

plasma membrane bounded cell projection [inference]

lamellipodium

neuron projection [inference]

neuron spine [inference]

dendritic spine

glial cell projection

actin-based cell projection [inference]

filopodium

organelle [inference]

membrane-bounded organelle [inference]

vesicle [inference]

intracellular vesicle [inference]

cytoplasmic vesicle

endosome [inference]

recycling endosome

pigment granule [inference]

melanosome

secretory vesicle [inference]

secretory granule [inference]

acrosomal vesicle

intracellular membrane-bounded organelle [inference]

intracellular vesicle [inference]

cytoplasmic vesicle

endosome [inference]

recycling endosome

pigment granule [inference]

melanosome

secretory vesicle [inference]

secretory granule [inference]

acrosomal vesicle

intracellular organelle [inference]

intracellular membrane-bounded organelle [inference]

intracellular vesicle [inference]

cytoplasmic vesicle

endosome [inference]

recycling endosome

pigment granule [inference]

melanosome

secretory vesicle [inference]

secretory granule [inference]

acrosomal vesicle

perinuclear region of cytoplasm

side of membrane [inference]

external side of plasma membrane

postsynapse [inference]

dendritic spine

Displaying entries **16 - 20** of 22 in total

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GO Term	Evidence Code	PMID
collagen binding	ISO
protein domain specific binding	ISO
fibronectin binding	IBA IEA ISO
calcium ion binding	IEA ISO
cell adhesion molecule binding	ISO

GO Hierarchy

molecular function

binding [inference]

protein binding

fibronectin binding

signaling receptor binding

integrin binding

integrin binding involved in cell-matrix adhesion

cytoskeletal protein binding [inference]

actin binding

actinin binding [inference]

alpha-actinin binding

enzyme binding [inference]

protease binding

kinase binding

protein kinase binding

protein tyrosine kinase binding

protein domain specific binding

cytokine binding [inference]

chemokine binding [inference]

C-X3-C chemokine binding

laminin binding

protein dimerization activity [inference]

protein heterodimerization activity

cell adhesion molecule binding

integrin binding

integrin binding involved in cell-matrix adhesion

cell adhesion mediator activity [inference]

cell-matrix adhesion mediator activity [inference]

ion binding [inference]

cation binding [inference]

metal ion binding [inference]

protein-containing complex binding

integrin binding

integrin binding involved in cell-matrix adhesion

collagen binding

collagen binding involved in cell-matrix adhesion

extracellular matrix binding [inference]

laminin binding

molecular transducer activity [inference]

signaling receptor activity

Gene Ontology information from NCBI Gene and UniProt.

OrthoDB (Group)

Group level

Rodentia

Group Name

integrin beta-1

Functional Category

G: Carbohydrate transport and metabolism
P: Inorganic ion transport and metabolism
T: Signal transduction mechanisms

Displaying **all 8** entries
Gene Ontology
C-X3-C chemokine binding
cell adhesion mediated by integrin
cell migration
collagen binding involved in cell-matrix adhesion
fibronectin binding
integrin binding
integrin-mediated signaling pathway
muscle organ development

Displaying entries **1 - 10** of 11 in total

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InterPro
EGF-like domain, extracellular
Integrin beta N-terminal
Integrin beta subunit, VWA domain
Integrin beta subunit, cytoplasmic domain
Integrin beta subunit, tail
Integrin beta subunit
Integrin beta tail domain superfamily
Integrin beta, epidermal growth factor-like domain 1
Integrin domain superfamily
PSI domain

Disease

Disease Ontology

Displaying **all 7** entries
DO ID	Disease Name	Source
DOID:10487	Hirschsprung's disease	Alliance of Genome Resources
DOID:10908	hydrocephalus	Alliance of Genome Resources
DOID:162	cancer	Alliance of Genome Resources
DOID:2921	glomerulonephritis	Alliance of Genome Resources
DOID:3908	lung non-small cell carcinoma	Alliance of Genome Resources
DOID:5409	lung small cell carcinoma	Alliance of Genome Resources
DOID:5844	myocardial infarction	Alliance of Genome Resources

Ortholog

Displaying entries **71 - 80** of **120** in total

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Species	Gene ID	OrthoDB	Orthologous MAtrix
Marmota marmota marmota	107140415	9994_0:001ff5
Sinocyclocheilus grahami	107565694		SINGR92305
Sinocyclocheilus grahami	107566918		SINGR92305
Ictalurus punctatus	108271845		ICTPU14604
Crocodylus porosus	109305855		CROPO00904
Castor canadensis	109697920	51338_0:003a33
Phascolarctos cinereus	110211245		PHACI04483
Mus caroli	110299930	10089_0:002412
Mus pahari	110337225	10093_0:0043c0
Meriones unguiculatus	110554841	10047_0:0025d1

GlyTouCan

GlyComb

GlycoPOST

UniCarb-DR

LM-GlycoRepo

All Resources

Other Information

Tools

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Summary

External Links

Annotation

OrthoDB (Group)

International Collaboration

Acknowledgements