Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
sodium channel, voltage-gated, type I, beta
Summary
- Gene Symbol
-
- Scn1b
- Organism
- Mus musculus (house mouse)
Annotation
- Keyword
-
- Cell membrane
- Cell projection
- Disulfide bond
- Glycoprotein
- Immunoglobulin domain
- Reference proteome
- Signal
- Sodium channel
- Transmembrane helix
- Voltage-gated channel
- Proteins
| UniProt | Protein Name |
|---|---|
| P97952 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| neuron projection development | ||
| regulation of atrial cardiac muscle cell membrane depolarization | ||
| axon guidance | ||
| sodium ion transmembrane transport | ||
| membrane depolarization during cardiac muscle cell action potential |
GO Hierarchy
- locomotion
biological process
biological regulation [inference]
regulation of biological process [inference]
regulation of localization [inference]
regulation of transport [inference]
regulation of transmembrane transport [inference]
regulation of monoatomic ion transport [inference]
positive regulation of transport [inference]
positive regulation of biological process [inference]
regulation of cellular process [inference]
regulation of transmembrane transport [inference]
positive regulation of cellular process [inference]
regulation of molecular function [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| sodium channel complex | ||
| T-tubule | ||
| perikaryon | ||
| voltage-gated sodium channel complex | ||
| plasma membrane |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| voltage-gated sodium channel activity | ||
| sodium channel regulator activity | ||
| voltage-gated sodium channel activity involved in cardiac muscle cell action potential | ||
| transmembrane transporter binding |
GO Hierarchy
OrthoDB (Group)
- Group level
- Rodentia
- Group Name
- sodium channel subunit beta-1
- Functional Category
-
- E: Amino acid transport and metabolism
- O: Posttranslational modification, protein turnover, chaperones
- P: Inorganic ion transport and metabolism
| InterPro |
|---|
| Immunoglobulin V-set domain |
| Immunoglobulin-like domain superfamily |
| Immunoglobulin-like fold |
| Sodium channel subunit beta-1/beta-3 |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0050650 | familial atrial fibrillation | |
| DOID:0060170 | generalized epilepsy with febrile seizures plus | |
| DOID:0080455 | developmental and epileptic encephalopathy 52 | |
| DOID:0110222 | Brugada syndrome 5 | |
| DOID:0111302 | generalized epilepsy with febrile seizures plus 1 | |
| DOID:9352 | type 2 diabetes mellitus |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 101024787 | PAPAN22725 | |||
| 101031197 | SAIBB28335 | |||
| 101072480 | TAKRU06457 | |||
| 101077821 | TAKRU46635 | |||
| 101101526 | FELCA34063 | |||
| 101568049 | 10160_0:002a00 | OCTDE14827 | ||
| 101607353 | 51337_0:0027b7 | JACJA11332 | ||
| 101687647 | MUSPF08062 | |||
| 101709080 | 10181_0:002e60 | HETGA07304 | ||
| 101831789 | 10036_0:004616 |
