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senataxin
Summary
- Gene Symbol
-
- SETX
- Organism
- Homo sapiens (human)
Annotation
- Keyword
-
- Alternative splicing
- Amyotrophic lateral sclerosis
- Biological rhythms
- Cell projection
- Coiled coil
- Cytoplasm
- DNA recombination
- DNA repair
- Disease variant
- Helicase
- Isopeptide bond
- Neurogenesis
- Nucleus
- Phosphoprotein
- Reference proteome
- Spermatogenesis
- Telomere
- Ubl conjugation
- Proteins
| UniProt | Protein Name |
|---|---|
| Q7Z333 |
|
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| double-strand break repair | ||
| DNA recombination | ||
| DNA-templated transcription termination | ||
| termination of RNA polymerase II transcription | ||
| mRNA splice site recognition |
GO Hierarchy
biological process
metabolic process [inference]
cellular process [inference]
response to stimulus [inference]
biological regulation [inference]
regulation of biological process [inference]
regulation of metabolic process [inference]
regulation of biosynthetic process [inference]
positive regulation of biosynthetic process [inference]
regulation of cellular biosynthetic process [inference]
regulation of macromolecule biosynthetic process [inference]
positive regulation of metabolic process [inference]
positive regulation of biosynthetic process [inference]
positive regulation of macromolecule metabolic process [inference]
positive regulation of cellular metabolic process [inference]
positive regulation of nitrogen compound metabolic process [inference]
regulation of cellular metabolic process [inference]
regulation of nucleobase-containing compound metabolic process [inference]
positive regulation of nucleobase-containing compound metabolic process [inference]
regulation of RNA metabolic process [inference]
positive regulation of cellular metabolic process [inference]
regulation of cellular biosynthetic process [inference]
regulation of macromolecule biosynthetic process [inference]
regulation of nitrogen compound metabolic process [inference]
regulation of nucleobase-containing compound metabolic process [inference]
positive regulation of nucleobase-containing compound metabolic process [inference]
regulation of RNA metabolic process [inference]
positive regulation of nitrogen compound metabolic process [inference]
regulation of macromolecule metabolic process [inference]
regulation of macromolecule biosynthetic process [inference]
positive regulation of macromolecule metabolic process [inference]
regulation of RNA metabolic process [inference]
regulation of primary metabolic process [inference]
regulation of nucleobase-containing compound metabolic process [inference]
positive regulation of nucleobase-containing compound metabolic process [inference]
regulation of RNA metabolic process [inference]
positive regulation of biological process [inference]
positive regulation of metabolic process [inference]
positive regulation of biosynthetic process [inference]
positive regulation of macromolecule metabolic process [inference]
positive regulation of cellular metabolic process [inference]
positive regulation of nitrogen compound metabolic process [inference]
positive regulation of cellular process [inference]
regulation of cellular process [inference]
regulation of cellular metabolic process [inference]
regulation of nucleobase-containing compound metabolic process [inference]
positive regulation of nucleobase-containing compound metabolic process [inference]
regulation of RNA metabolic process [inference]
positive regulation of cellular metabolic process [inference]
regulation of cellular biosynthetic process [inference]
regulation of macromolecule biosynthetic process [inference]
positive regulation of cellular process [inference]
regulation of cellular component organization [inference]
| GO Term | Evidence Code | PMID |
|---|---|---|
| nuclear chromosome | ||
| chromosome, telomeric region | ||
| nucleus | ||
| nucleoplasm | ||
| nucleolus |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| transcription termination site sequence-specific DNA binding | ||
| transcription termination site sequence-specific DNA binding | ||
| DNA binding | ||
| DNA helicase activity | ||
| RNA binding |
OrthoDB (Group)
- Group level
- Eukaryota
- Group Name
- Senataxin
- Functional Category
-
- I: Lipid transport and metabolism
- K: Transcription
- Q: Secondary metabolites biosynthesis, transport and catabolism
- T: Signal transduction mechanisms
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0050755 | spinocerebellar ataxia with axonal neuropathy 2 | |
| DOID:0060196 | amyotrophic lateral sclerosis type 4 |
Ortholog
| Species | Gene ID | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|
| 4343 | WB:WBGene00016566 | ||
| 17454 | WB:WBGene00016566 | ||
| 23064 | Xenbase:XB-GENE-966858 | ||
| 269254 | Xenbase:XB-GENE-966858 | MOUSE31920 | |
| 362096 | RATNO27521 | ||
| 464815 | PANTR45109 | ||
| 480691 | CANLF19336 | ||
| 534284 | BOVIN03342 | ||
| 562474 | DANRE21139 | ||
| 715065 | MACMU12884 |
