Submissions
GlyTouCan
Glycan Structure Repository
GlyComb
Glycoconjugate Repository
GlycoPOST
Glycomics MS raw data Repository
UniCarb-DR
Glycomics MS Repository for glycan annotations from GlycoWorkbench
LM-GlycoRepo
Repository for lectin-assisted multimodality data
All Resources
Genes / Proteins / Lipids Glycans / Glycoconjugates Glycomes Pathways / Interactions / Diseases / Organisms
LIM domain binding 3
Summary
- Gene Symbol
-
- Ldb3
- Organism
- Mus musculus (house mouse)
Annotation
- Keyword
-
- 3D-structure
- Alternative splicing
- Cell projection
- Cytoskeleton
- LIM domain
- Methylation
- Phosphoprotein
- Proteomics identification
- Reference proteome
- Repeat
- Proteins
Gene Ontology (GO)
| GO Term | Evidence Code | PMID |
|---|---|---|
| actin cytoskeleton organization | ||
| sarcomere organization | ||
| heart development | ||
| muscle structure development |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| filamentous actin | ||
| adherens junction | ||
| pseudopodium | ||
| cytoskeleton | ||
| Z disc |
GO Hierarchy
| GO Term | Evidence Code | PMID |
|---|---|---|
| protein binding | ||
| actin binding | ||
| enzyme binding | ||
| metal ion binding | ||
| muscle alpha-actinin binding |
GO Hierarchy
OrthoDB (Group)
- Group level
- Rodentia
- Group Name
- LIM domain-binding protein 3
- Functional Category
-
- J: Translation, ribosomal structure and biogenesis
- O: Posttranslational modification, protein turnover, chaperones
- T: Signal transduction mechanisms
| Gene Ontology |
|---|
| actin binding |
| actin cytoskeleton organization |
| metal ion binding |
| muscle alpha-actinin binding |
| muscle structure development |
| InterPro |
|---|
| PDZ and LIM domain protein 1-4/Zasp-like, middle domain |
| PDZ domain |
| PDZ superfamily |
| Zasp-like motif |
| Zinc finger, LIM-type |
Disease
- Disease Ontology
| DO ID | Disease Name | Source |
|---|---|---|
| DOID:0050700 | cardiomyopathy | |
| DOID:0080092 | myofibrillar myopathy 1 | |
| DOID:0080095 | myofibrillar myopathy 4 | |
| DOID:0081337 | congenital myopathy | |
| DOID:0110423 | dilated cardiomyopathy 1C | |
| DOID:11720 | distal myopathy | |
| DOID:11722 | myotonic dystrophy type 1 | |
| DOID:12930 | dilated cardiomyopathy | |
| DOID:423 | myopathy |
Ortholog
| Species | Gene ID | OrthoDB | Alliance of Genome Resources | Orthologous MAtrix |
|---|---|---|---|---|
| 11155 | HGNC:15710 | HUMAN02021 | ||
| 36740 | FB:FBgn0265991 | |||
| 177701 | WB:WBGene00001132 | |||
| 498587 | 10116_1:00493f | RGD:1564875 | RATNO11598 | |
| 697140 | MACMU45948 | |||
| 735476 | PANTR01054 | |||
| 794339 | ZFIN:ZDB-GENE-040121-6 | |||
| 100013468 | MONDO04614 | |||
| 100052406 | HORSE18406 | |||
| 100078010 | ORNAN17356 |
